DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Raf and AT2G31800

DIOPT Version :9

Sequence 1:NP_001096867.3 Gene:Raf / 31221 FlyBaseID:FBgn0003079 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_180739.2 Gene:AT2G31800 / 817737 AraportID:AT2G31800 Length:476 Species:Arabidopsis thaliana


Alignment Length:484 Identity:122/484 - (25%)
Similarity:194/484 - (40%) Gaps:110/484 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 NGVGFPGRGTAVRFNMS------SRSRSRRCS----------SSGSSSSSKP----PSSSSGNHR 331
            |.||...||.:.:|:..      ||..:|:.|          |.|..||..|    |..|:|   
plant     3 NVVGQLKRGISRQFSTGSLRRTLSRQFTRQASHDPRRNNMRFSFGRQSSLDPIRRSPDGSNG--- 64

  Fly   332 QGRPPRISQDDRSNSAPNVCINNIRSVTSEVQ---------RSLIMQARPPLPH--PCTDHSNST 385
                |:::..|..::...:.....|.....||         .|:.:..|..| |  .|..|    
plant    65 ----PQLAVPDNLDATMQLLFVACRGDVEGVQDLLDEGIDVNSIDLDGRTAL-HIAACEGH---- 120

  Fly   386 QASPTSTLKHNRPRARSADESNK--NLLLRDAK--SSEENWNILAEE------------ILIGPR 434
                ...:|....|..:.|..::  :....|||  .:.:.:|||...            ::..||
plant   121 ----VDVVKLLLTRKANIDARDRWGSTAAADAKYYGNMDVFNILKARGAKVPKTKRTPMVVANPR 181

  Fly   435 -------------------IGSGSFGTVYR-AHWHG-PVAVKTLNVKTPSPAQ-LQAFKNEVAML 477
                               |..|    :|: |.|:| .|:||.|:......:. :.|||:|:.:.
plant   182 EVPEYELNPQELQVRKADGISKG----IYQVAKWNGTKVSVKILDKDLYKDSDTINAFKHELTLF 242

  Fly   478 KKTRHCNILLFMGCVSK-PSLAIVTQWCE----GSSLYKHVHVSETKFKLNTLIDIGRQVAQGMD 537
            :|.||.|::.|:|.|:: ..:.||:::..    ||.|.|...:|..|. |...:||    |:||:
plant   243 EKVRHPNVVQFVGAVTQNVPMMIVSEYHPKGDLGSYLQKKGRLSPAKV-LRFALDI----ARGMN 302

  Fly   538 YLH---AKNIIHRDLKSNNIFLHEDLSVKIGDFGLAT-AKTRWSGEKQANQPT---GSILWMAPE 595
            |||   .:.:||.|||..||.|.....:|:..|||.: ||......|..|...   .|...||||
plant   303 YLHECKPEPVIHCDLKPKNIMLDSGGHLKVAGFGLISFAKLSSDKSKILNHGAHIDPSNYCMAPE 367

  Fly   596 VIRMQELNPYSFQSDVYAFGIVMYELLAECLPYGHISNKDQILFMVGRGLLRPDMSQVRSDAPQA 660
            |.: .|:  :....|.|:||:|:||::....|:.....::.:..|...| .||.........||.
plant   368 VYK-DEI--FDRSVDSYSFGVVLYEMIEGVQPFHPKPPEEAVKLMCLEG-RRPSFKAKSKSCPQE 428

  Fly   661 LKRLAEDCIKYTPKDRPLFRPLLNMLENM 689
            ::.|.|:|.......||.|..::..|:.:
plant   429 MRELIEECWDTETFVRPTFSEIIVRLDKI 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RafNP_001096867.3 RBD_RAF 142..212 CDD:340514
C1_Raf 221..269 CDD:410361
STKc_Raf 435..687 CDD:270964 81/266 (30%)
AT2G31800NP_180739.2 ANK 80..178 CDD:238125 18/106 (17%)
Ank_2 80..167 CDD:289560 18/95 (19%)
ANK repeat 107..138 CDD:293786 8/39 (21%)
ANK repeat 140..165 CDD:293786 6/24 (25%)
STKc_MAP3K-like 201..454 CDD:270901 81/265 (31%)
TyrKc 203..454 CDD:197581 80/263 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44329
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.