DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Raf and raf1b

DIOPT Version :10

Sequence 1:NP_525047.1 Gene:Raf / 31221 FlyBaseID:FBgn0003079 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001186684.1 Gene:raf1b / 557109 ZFINID:ZDB-GENE-090826-2 Length:629 Species:Danio rerio


Alignment Length:593 Identity:290/593 - (48%)
Similarity:374/593 - (63%) Gaps:54/593 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 LRAHLPNQQRTSVEVISGVRLCDALMKALKLRQLTPDMCEV---STTHSGRHI-IPWHTDIGTLH 203
            :|..|||:|||.|.|.:|:.|.:.|:||||:|.|.|:.|.|   ...||.:.: :.|.||..:|.
Zfish    56 IRVFLPNKQRTVVNVRAGMTLRNCLIKALKVRGLQPECCAVFKLQREHSAKKLRMDWSTDSTSLV 120

  Fly   204 VEEIFVRLLDKFPIRTHIKHQIIRKTFFSLVFCEGCRRLLFTGFYCSQCNFRFHQRCANRVPMLC 268
            .||:.|.:||..|:.|   |..:||||..|.||:.|::.|..||.|..|.::||:.|:.:||.:|
Zfish   121 GEELLVEVL
DHVPLTT---HNFVRKTFLKLAFCDICQKFLLHGFRCQTCGYKFHEHCSTKVPTMC 182

  Fly   269 QPFPMDSYYQLLLAENPDNGVGFPGRGTAVRFNMSSRSRSRRCSSSGSSSSSKPPSSSSGNHRQG 333
            ..:  .:..||||         ||..|......:...| |||..:|..|.|.        .||..
Zfish   183 VDW--SNIRQLLL---------FPTPGENGALTLPPLS-SRRMQNSRFSFSP--------YHRYS 227

  Fly   334 RP-----------PRISQDDR--SNSAPNVCINNIRSVTSEVQRSLIMQARPPLPHPCTDHSNST 385
            .|           |.:|...:  |.|.|||   ::.|.|..|..:...:|   |.|   |.|.|.
Zfish   228 TPNALNYITPLPSPGVSLGHKVLSTSTPNV---HMVSTTQPVDEAAYQEA---LRH---DESGSP 283

  Fly   386 Q-ASPTSTLK----HNRPRARSADESNKNLLLRDAKSSEENWNILAEEILIGPRIGSGSFGTVYR 445
            | .|||...|    .:|.:|.|::...|.:..|:.:.|...|.|.|.|:|:..|||||||||||:
Zfish   284 QNLSPTEWSKTPAPAHREKAPSSNTQEKRIRPREKRDSSYYWEIEATEVLLLSRIGSGSFGTVYK 348

  Fly   446 AHWHGPVAVKTLNVKTPSPAQLQAFKNEVAMLKKTRHCNILLFMGCVSKPSLAIVTQWCEGSSLY 510
            ..|||.||||.|.|..|:|.|||||:||||:|:||||.||:||||.::|..||||||||||||||
Zfish   349 GKWHGDVAVKILKVINPTPEQLQAFRNEVAVLRKTRHVNIVLFMGYMTKVKLAIVTQWCEGSSLY 413

  Fly   511 KHVHVSETKFKLNTLIDIGRQVAQGMDYLHAKNIIHRDLKSNNIFLHEDLSVKIGDFGLATAKTR 575
            ||:||.||.|::..|:||.||.||||||||||||||||:|||||||||.|:||||||||||.|.|
Zfish   414 KHLHVQETNFQMFQLMDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKAR 478

  Fly   576 WSGEKQANQPTGSILWMAPEVIRMQELNPYSFQSDVYAFGIVMYELLAECLPYGHISNKDQILFM 640
            |||..:..||:||||||||||||||:.||||||||||::|||:|||:...|||..|.|:|||:||
Zfish   479 WSGSHRVEQPSGSILWMAPEVIRMQDNNPYSFQSDVYSYGIVLYELMTGELPYSMIGNRDQIIFM 543

  Fly   641 VGRGLLRPDMSQVRSDAPQALKRLAEDCIKYTPKDRPLFRPLLNMLENMLRTLPKIHRSASEPNL 705
            ||||.|.||:|::....|:|:|||..|||:.|.::||||..:|:.:|.:..:||||:||||||:|
Zfish   544 VGRGYLSPDLSKLYKSCPKAMKRLVSDCIQKTKEERPLFPQILSSIELLQHSLPKINRSASEPSL 608

  Fly   706 TQSQLQND 713
            .::....|
Zfish   609 HRATHTED 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RafNP_525047.1 RBD_RAF 142..212 CDD:340514 30/72 (42%)
C1_Raf 221..269 CDD:410361 19/47 (40%)
STKc_Raf 435..687 CDD:270964 173/251 (69%)
raf1bNP_001186684.1 Ubl1_cv_Nsp3_N-like 53..129 CDD:475130 30/72 (42%)
C1_A_C-Raf 134..185 CDD:410420 21/53 (40%)
Protein Kinases, catalytic domain 319..601 CDD:473864 185/281 (66%)

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