DRSC/TRiP Functional Genomics Resources

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Protein Alignment Raf and araf

DIOPT Version :9

Sequence 1:NP_001096867.3 Gene:Raf / 31221 FlyBaseID:FBgn0003079 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_991306.1 Gene:araf / 403063 ZFINID:ZDB-GENE-050102-2 Length:608 Species:Danio rerio


Alignment Length:585 Identity:267/585 - (45%)
Similarity:357/585 - (61%) Gaps:43/585 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 LRAHLPNQQRTSVEVISGVRLCDALMKALKLRQLTPDMCEVSTTHSGR-HIIPWHTDIGTLHVEE 206
            :|.:|||:|||.|.|..|..:.|:|.||||:|.|:.|.|.|.....|| .:..|.|||..|..||
Zfish    25 IRVYLPNKQRTVVNVRPGQTVYDSLDKALKVRGLSQDCCAVFRLLEGRKRLTEWDTDITPLVGEE 89

  Fly   207 IFVRLLDKFPIRTHIKHQIIRKTFFSLVFCEGCRRLLFTGFYCSQCNFRFHQRCANRVPMLCQPF 271
            :.|.:||..|:   ..|..:|||||.|.:|:.|.:.||.||.|..|.::|||.|:::||.:|  .
Zfish    90 LLVEVLDDVPL---TMHNFVRKTFFKLAYCDFCHKFLFNGFRCQTCGYKFHQHCSSKVPTVC--V 149

  Fly   272 PMDSYYQLLLAENPDNGVGFPGRGTAVRFNMSSRSRSRR-CSSSGSSSSSKPPSSSSG--NHRQG 333
            .||:..:..:....|        ..|:....::.|.|:. ...:..|...:.|||.|.  ...:|
Zfish   150 DMDTMTKRCVNNTED--------CPAILIYPATNSISQSDLPLTSDSPGGELPSSPSNFCLFIRG 206

  Fly   334 RPPRISQDDRSNSAPNV------------------CINNIRSVTSEVQRSLIMQARPPLPHPCTD 380
            ...:..|..||.|.|||                  .|:.:.|.|.        ....|.|.....
Zfish   207 EDGQSLQRHRSTSTPNVHMVSTLEPGAAGLLEEPFKISTVASYTG--------YESSPKPSTSPP 263

  Fly   381 HSNSTQASPTSTLKHNRPRARSADESNKNLLLRDAKSSEENWNILAEEILIGPRIGSGSFGTVYR 445
            |..|....|..:....:.|.:|:.:..|.:.....:.|...|.:...|:.:..|||:||||||::
Zfish   264 HLGSPGRKPPKSPSEPKERKQSSSDDKKKVHRGGYRDSSYYWEVHPREVSMLKRIGAGSFGTVFK 328

  Fly   446 AHWHGPVAVKTLNVKTPSPAQLQAFKNEVAMLKKTRHCNILLFMGCVSKPSLAIVTQWCEGSSLY 510
            ..|||.||:|.|.|..|:|.||||||||:.:|:||||.|||||||.:::|:.||:||||||||||
Zfish   329 GKWHGDVAIKILKVTEPTPEQLQAFKNEMQVLRKTRHVNILLFMGFMTRPNFAIITQWCEGSSLY 393

  Fly   511 KHVHVSETKFKLNTLIDIGRQVAQGMDYLHAKNIIHRDLKSNNIFLHEDLSVKIGDFGLATAKTR 575
            :|:||:||||.....||:.||.||||||||||||||||||||||||||..:||||||||||.|:|
Zfish   394 RHLHVTETKFDTMRRIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGWTVKIGDFGLATVKSR 458

  Fly   576 WSGEKQANQPTGSILWMAPEVIRMQELNPYSFQSDVYAFGIVMYELLAECLPYGHISNKDQILFM 640
            |||.:|..||:||||||||||||||:.|||:||||||.:|:|:|||::..|||.:|:|:|||:||
Zfish   459 WSGSQQVEQPSGSILWMAPEVIRMQDTNPYTFQSDVYGYGVVLYELMSGTLPYSNINNRDQIIFM 523

  Fly   641 VGRGLLRPDMSQVRSDAPQALKRLAEDCIKYTPKDRPLFRPLLNMLENMLRTLPKIHRSASEPNL 705
            ||||.|.||:|::.|:.|:::|||..||:|:...:||||..:|..:|.:...||||.||||||:|
Zfish   524 VGRGYLSPDLSKLYSNCPKSMKRLIIDCLKFKRDERPLFPQILVSIEQVQELLPKIERSASEPSL 588

  Fly   706  705
            Zfish   589  588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RafNP_001096867.3 RBD_RAF 142..212 CDD:340514 31/69 (45%)
C1_Raf 221..269 CDD:410361 21/47 (45%)
STKc_Raf 435..687 CDD:270964 165/251 (66%)
arafNP_991306.1 Raf_RBD 24..95 CDD:176411 31/69 (45%)
C1 103..148 CDD:237996 21/44 (48%)
STKc_A-Raf 311..575 CDD:271052 168/263 (64%)
Pkinase 315..566 CDD:278497 165/250 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 382 1.000 Domainoid score I789
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 584 1.000 Inparanoid score I967
OMA 1 1.010 - - QHG49873
OrthoDB 1 1.010 - - D129822at33208
OrthoFinder 1 1.000 - - FOG0001587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44329
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2599
SonicParanoid 1 1.000 - - X994
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.110

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