DRSC/TRiP Functional Genomics Resources

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Protein Alignment Raf and sel-15

DIOPT Version :9

Sequence 1:NP_001096867.3 Gene:Raf / 31221 FlyBaseID:FBgn0003079 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001366799.1 Gene:sel-15 / 175225 WormBaseID:WBGene00016030 Length:847 Species:Caenorhabditis elegans


Alignment Length:495 Identity:134/495 - (27%)
Similarity:214/495 - (43%) Gaps:70/495 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 QLLLAENPDNGV---GFPGRGTAVRFNMSSRSRSRRCSSSGSSSSSKPPSSSSGNHRQGRPPRIS 339
            |.||....|..:   .|.|.....:....:...|:..|:..:.:.|..|||::..:     ..:|
 Worm   373 QYLLENGADQSLASRAFEGGALRQQAGPGTNRPSKVASAIMALNRSDTPSSNASYN-----STVS 432

  Fly   340 QDD----------RSNSAPNVCINN--IRSVTSEVQRSLIMQARPPLPHPCTDHSNSTQASPTST 392
            .||          |.:.|....:.:  .|:|..:|               |:::|:.  .|..:.
 Worm   433 LDDQQTPVIWAYERGHDAIVALLKHYAARTVEGDV---------------CSEYSSG--ESSYTP 480

  Fly   393 LKHNRPRARSADESNKNLL-LRDAKSSEENWNILAEEILIGPRIGSGSFGTVYRAHWHGP-VAVK 455
            |.....|..|......:|| ||.|..:.  :::...||.....|||||||.||:..:.|. ||||
 Worm   481 LPSPMGRLTSLTRDKADLLQLRSALPAP--FHLCLAEIEFQESIGSGSFGKVYKGTYRGKLVAVK 543

  Fly   456 TLNVKT-PSPAQLQAFKNEVAMLKKTRHCNILLFMG-CVSKPS-LAIVTQWCEGSSLYKHVH--- 514
            ...... ...::......||::|.:..|.|::.|:| .:..|| .||:|::.|..||::.:|   
 Worm   544 RYRAMAFGCKSETDMLCREVSILSRLAHPNVVAFVGTSLDDPSQFAIITEFVENGSLFRLLHEEK 608

  Fly   515 -VSETKFKLNTLIDIGRQVAQGMDYLH---AKNIIHRDLKSNNIFLHEDLSVKIGDFGLATAKTR 575
             |.:..|:|...:|    ||:||.|||   ||.:|||||.|:||.:|.|....:.|||.:....:
 Worm   609 RVMDPAFRLRISLD----VARGMRYLHESAAKPVIHRDLNSHNILIHADGRSVVADFGESRFVCQ 669

  Fly   576 WSGEKQANQPTGSILWMAPEVIRMQELNPYSFQSDVYAFGIVMYELLAECLPYGHISNKDQILFM 640
            ...|....|| |::.||||||  ..:...|..:.||::|.:|::|:....||:.|:........|
 Worm   670 REDENLTKQP-GNLRWMAPEV--FSQSGKYDRKVDVFSFALVIWEIHTAELPFSHLKPAAAAAEM 731

  Fly   641 V-GRGLLRPDM-SQVRSDAPQALKRLAEDCIKYTPKDRPLFRPLLNMLENMLRTLPKIHRSASEP 703
            . .||  ||.: :|..:..|..:..|...........||.|..::.:||..:.:   .|...|.|
 Worm   732 TYKRG--RPTLPNQPTAQFPAHILSLIPQAWHPESSSRPDFVEIVALLEPHVES---THTDISAP 791

  Fly   704 NLTQSQL--QNDEFLYLPSP--KTPVNFNNFQFFGSAGNI 739
            : |.|||  |.::....|.|  |.|...:......:.|.:
 Worm   792 S-TVSQLTSQWEQLSVAPPPASKFPPILSALHGIAATGTV 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RafNP_001096867.3 RBD_RAF 142..212 CDD:340514
C1_Raf 221..269 CDD:410361
STKc_Raf 435..687 CDD:270964 86/264 (33%)
sel-15NP_001366799.1 ANKYR 3..217 CDD:223738
ANK repeat 115..147 CDD:293786
PHA03095 128..>388 CDD:222980 4/14 (29%)
ANK repeat 153..180 CDD:293786
ANK repeat 182..213 CDD:293786
ANK repeat 215..246 CDD:293786
ANK repeat 285..318 CDD:293786
ANK repeat 320..353 CDD:293786
ANKYR <323..458 CDD:223738 17/89 (19%)
ANK repeat 355..380 CDD:293786 3/6 (50%)
PKc_TNNI3K 522..780 CDD:270966 88/266 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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