DRSC/TRiP Functional Genomics Resources

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Protein Alignment Raf and araf

DIOPT Version :9

Sequence 1:NP_001096867.3 Gene:Raf / 31221 FlyBaseID:FBgn0003079 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_031746913.1 Gene:araf / 100495479 XenbaseID:XB-GENE-5755831 Length:644 Species:Xenopus tropicalis


Alignment Length:657 Identity:298/657 - (45%)
Similarity:384/657 - (58%) Gaps:99/657 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 QQEDSSLVERFKEQPHYQNQTQILQQQRQLARVHHGNDLTDSLGSQPGSQCGTLTRQPKILLRAH 146
            |||..|......|.||.:                             |...||        ::.:
 Frog    48 QQESPSRGASVSEYPHAE-----------------------------GKSGGT--------VKVY 75

  Fly   147 LPNQQRTSVEVISGVRLCDALMKALKLRQLTPDMCEVSTTHSGRH-IIPWHTDIGTLHVEEIFVR 210
            |||||||.|.|..|:.:.|:|.||||:|.|:.:.|.|.....||. :..|.|||..|..||:.|.
 Frog    76 LPNQQRTVVNVRPGMTVYDSLDKALKVRGLSQECCAVYRLIQGRKALTDWETDITPLVGEELMVE 140

  Fly   211 LLDKFPIRTHIKHQIIRKTFFSLVFCEGCRRLLFTGFYCSQCNFRFHQRCANRVPMLC-----QP 270
            :|...|:.   .|..:|||.|:|.||:.|.:.||.||.|..|.::|||.|:::||..|     .|
 Frog   141 VLADVPLS---MHNFVRKTHFTLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTACVDMAKLP 202

  Fly   271 FPM--------DSYYQLLLAENPDNGVGFPGRGTAVRFNMSSRSRSRRCSSSGSSSSSKPPSSSS 327
            .|:        .|||     |:|           .|...:|.:..|.|....||:|.|.|     
 Frog   203 KPLTPLSYQDFQSYY-----EHP-----------TVHLPLSPQPPSPRTQHPGSASFSFP----- 246

  Fly   328 GNHRQGRPPRISQDDRSNSAPNVCINNIRSVTSEVQRSLIMQA-----------RPPLPHPCTDH 381
               .:|:|   .|..||.|.|||   :|.|.|..|..|:|.:|           .|....|....
 Frog   247 ---GEGQP---LQRHRSTSTPNV---HIDSTTGPVDNSIIEEALRSAAVTPVDGPPKSAQPLGSK 302

  Fly   382 SNSTQASPTSTLKHNRPRARSADESNKNLLLRDAKSSEENWNILAEEILIGPRIGSGSFGTVYRA 446
            |..|: ||:.|   .|.|..||.:..|.:.....:.|...|.:.:.|::|..|||:||||||||.
 Frog   303 SPQTK-SPSET---TRERKTSASDEKKKVKQLGYRDSSYYWEVNSSEVIILKRIGTGSFGTVYRG 363

  Fly   447 HWHGPVAVKTLNVKTPSPAQLQAFKNEVAMLKKTRHCNILLFMGCVSKPSLAIVTQWCEGSSLYK 511
            .|||.||||.|.|..|:..|:||||||:.:|:||||.|||||||.:::|..||:||||||||||:
 Frog   364 KWHGDVAVKILKVTNPTSEQIQAFKNEMQVLRKTRHVNILLFMGFMTRPQFAIITQWCEGSSLYR 428

  Fly   512 HVHVSETKFKLNTLIDIGRQVAQGMDYLHAKNIIHRDLKSNNIFLHEDLSVKIGDFGLATAKTRW 576
            |:||.||:|.:..||||.||.||||||||||||||||||||||||||.|:||||||||||.||||
 Frog   429 HLHVIETRFDIFQLIDIARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRW 493

  Fly   577 SGEKQANQPTGSILWMAPEVIRMQELNPYSFQSDVYAFGIVMYELLAECLPYGHISNKDQILFMV 641
            ||.:|..||:|||||||||||||||.:|||.||||||:|:|:|||:|..|||.:|:|:|||:|||
 Frog   494 SGSQQVEQPSGSILWMAPEVIRMQESSPYSSQSDVYAYGVVLYELMAGLLPYANINNRDQIIFMV 558

  Fly   642 GRGLLRPDMSQVRSDAPQALKRLAEDCIKYTPKDRPLFRPLLNMLENMLRTLPKIHRSASEPNLT 706
            |||.|.||:|:|.::.|:|:|||..:|:|:..::||||..:|:.:|.:.|.||||.||||||:|.
 Frog   559 GRGYLTPDLSKVSNNCPKAMKRLLVNCLKFKREERPLFPQILSSIELLQRALPKIERSASEPSLH 623

  Fly   707 QSQLQND 713
            ::....|
 Frog   624 RAVNSED 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RafNP_001096867.3 RBD_RAF 142..212 CDD:340514 30/70 (43%)
C1_Raf 221..269 CDD:410361 22/52 (42%)
STKc_Raf 435..687 CDD:270964 171/251 (68%)
arafXP_031746913.1 RBD_ARAF 70..142 CDD:340653 32/79 (41%)
C1_A_C-Raf 147..198 CDD:410420 22/53 (42%)
PKc_like 345..609 CDD:419665 175/263 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 376 1.000 Domainoid score I858
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 569 1.000 Inparanoid score I1051
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D129822at33208
OrthoFinder 1 1.000 - - FOG0001587
OrthoInspector 1 1.000 - - otm48176
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X994
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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