DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and hscC

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_415183.1 Gene:hscC / 945218 ECOCYCID:G6357 Length:556 Species:Escherichia coli


Alignment Length:568 Identity:129/568 - (22%)
Similarity:230/568 - (40%) Gaps:136/568 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MSVDLGSEWMKVGVVSPGVPMEIALNRESKRKTPAILAFRDGTRTIGEDAQTIGIKDPNSAYGYL 87
            :.:|||:....:.|...|. .::..|:..:..||:|::.                 |.|:..   
E. coli     8 IGIDLGTTNSLIAVWKDGA-AQLIPNKFGEYLTPSIISM-----------------DENNHI--- 51

  Fly    88 LDLLGKTIDNPIVDLYRKRFPYYNIVGDPERNTVVFRKS---------DTDEFSVEELVAQLLVK 143
              |:||    |.|.   :|      ...|::...:|:::         .:|.|:..||.:.:|..
E. coli    52 --LVGK----PAVS---RR------TSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRS 101

  Fly   144 AKQFAQESVQQPITECVLTVPGYFGQAEREALLSAAQLANLKVLQLINDYAAVALNYGVFHRGEI 208
            .|:.|:|.:|:||.:.|::||.||...:|:....||:||.|..::|||:..|.|:.||: |..:.
E. coli   102 LKEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL-HTQQN 165

  Fly   209 NETAQYFLFYDMGAYKTSAAVVSYQLVKDKQTREINPVVQVLGVGYDRTLGGLEIQLRLRDYLAQ 273
            ..:    |.:|:|.......|:.|          ..||::|.....|..|||.:....|.|    
E. coli   166 TRS----LVFDLGGGTFDVTVLEY----------ATPVIEVHASAGDNFLGGEDFTHMLVD---- 212

  Fly   274 EFNALKKTKTDVTT-SPRALAKLFK--EAGRLKNVLSANTEFFAQIENLIEDIDFKLPVTR--EK 333
              ..||:.....|| :...||.|:.  ||.:..|....:..:..|.|            ||  |.
E. coli   213 --EVLKRADVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEE------------TRECEF 263

  Fly   334 LEQLCEDLW----PRATKPLEEALASSHLSLDVINQVILFGGGTRVPRVQETIKAVIKQELGKNL 394
            .|...||||    .|...|:|:||..:.|....|:.::|.||.:::|.||.....:..:...::.
E. coli   264 YENELEDLWLPLLNRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSY 328

  Fly   395 NADESATMGAVYKAADLSAGFKVKKFVVKDATLFPLQVSFERDPGDGAAVKQVKR---------A 450
            :......:||..:||.......:::.::.|...:.|.|...|....|.....::|         .
E. coli   329 DPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRVE 393

  Fly   451 LFALMNPYPQKKVITFNKH------------TDDFEFYVN----YADLD-RYSKE-----EIAAL 493
            .::.|  :|::..||.|.:            .:.|:..:.    |..:| |:|.:     |:..|
E. coli   394 TYSTM--HPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGLLEVDVL 456

  Fly   494 ---GS-----LNVTKVQL--KQVKE------LLEKSKKELVDNKGIKA 525
               ||     :|.:.|.|  :|::|      .|:...::::.|:..||
E. coli   457 LEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKA 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 129/568 (23%)
HYOU1-like_NBD 23..409 CDD:212672 98/403 (24%)
TAF4 <572..>627 CDD:296797
hscCNP_415183.1 HscC_like_NBD 8..343 CDD:212677 98/403 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.900

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