DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and SSB1

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_010052.1 Gene:SSB1 / 851369 SGDID:S000002388 Length:613 Species:Saccharomyces cerevisiae


Alignment Length:644 Identity:166/644 - (25%)
Similarity:295/644 - (45%) Gaps:85/644 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QGAAVMSVDLGSEWMKVGVVSPGVPMEIALNRESKRKTPAILAFRDGTRTIGEDAQTIGIKDPNS 82
            |||  :.:|||:.:..|......|  ||..|.:..|.||:.:||....|.||:.|:.....:|.:
Yeast     7 QGA--IGIDLGTTYSCVATYESSV--EIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRN 67

  Fly    83 AYGYLLDLLGKTIDNPIVDLYRKRFPYYNIVGDPERNTVVFRK--SDTDEFSVEELVAQLLVKAK 145
            .......|:|:..|:..|....|.:|:..|  |.:.|.|:..:  .:|..||.:|:.|.:|.|.|
Yeast    68 TVFDAKRLIGRRFDDESVQKDMKTWPFKVI--DVDGNPVIEVQYLEETKTFSPQEISAMVLTKMK 130

  Fly   146 QFAQESVQQPITECVLTVPGYFGQAEREALLSAAQLANLKVLQLINDYAAVALNYGVFHRGEINE 210
            :.|:..:.:.:.:.|:|||.||..|:|:|...|..::.|.||::||:..|.|:.||: ..|: :|
Yeast   131 EIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGL-GAGK-SE 193

  Fly   211 TAQYFLFYDMGAYKTSAAVVSYQLVKDKQTREINPVVQVLGVGYDRTLGGLEIQLRLRDYLAQEF 275
            ..::.|.:|:|......:::..          ...|..|.....:..|||.:....|.::...||
Yeast   194 KERHVLIFDLGGGTFDVSLLHI----------AGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEF 248

  Fly   276 NALKKTKTDVTTSPRALAKLFKEAGRLKNVLSANTEFFAQIENLIEDIDFKLPVTREKLEQLCED 340
            .  |||..|::...|||.:|...|.|.|..||:.|:...::::|.:..||:..:||.:.|.|...
Yeast   249 K--KKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAA 311

  Fly   341 LWPRATKPLEEALASSHLSLDVINQVILFGGGTRVPRVQETIKAVIK-QELGKNLNADESATMGA 404
            |:....:|:|:.|..:.:|...|::|:|.||.||:|:||:.:..... ::|.|::|.||:...||
Yeast   312 LFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGA 376

  Fly   405 VYKAADL---SAGFKVKKFVVKDATLFPLQVSFERDPGDGAAVKQVKRALFALMNP----YPQKK 462
            ..:.|.|   |...:.|..::.|.....|.|..:.|             :|.::.|    .|..|
Yeast   377 AVQGAILTGQSTSDETKDLLLLDVAPLSLGVGMQGD-------------MFGIVVPRNTTVPTIK 428

  Fly   463 VITF-----NKHTDDFEFYVNYADLDRYSKEEIAALGSLNVTKVQLKQVKELLEKSKKELVDNKG 522
            ..||     |:.|..|..|..    :|.:.:|...||..::..:.:....|.:            
Yeast   429 RRTFTTCADNQTTVQFPVYQG----ERVNCKENTLLGEFDLKNIPMMPAGEPV------------ 477

  Fly   523 IKAYFYLDDSGIFRCTGVEYVYEKQKPEDDADEDSTLSKFGSTLSKLFTKEGEEKKDNSEQEEAA 587
            ::|.|.:|.:||.:.|.||....|       ..:.|:|   :.:.:|.::|.|:..:.:|:.:||
Yeast   478 LEAIFEVDANGILKVTAVEKSTGK-------SSNITIS---NAVGRLSSEEIEKMVNQAEEFKAA 532

  Fly   588 NAGEEPSKSEDNEKAKEEDASKEQ---------KSEESTKQDTEAK-NETIKLVTVKSP 636
            :.. ...|.|..::.:...||.||         |.:..:|...||. ::.:..:.::.|
Yeast   533 DEA-FAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIEDP 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 162/627 (26%)
HYOU1-like_NBD 23..409 CDD:212672 112/388 (29%)
TAF4 <572..>627 CDD:296797 15/64 (23%)
SSB1NP_010052.1 PTZ00009 6..575 CDD:240227 163/627 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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