DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and hspa12a

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:XP_017207164.1 Gene:hspa12a / 751725 ZFINID:ZDB-GENE-031001-1 Length:671 Species:Danio rerio


Alignment Length:550 Identity:104/550 - (18%)
Similarity:185/550 - (33%) Gaps:189/550 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 QTIGIKDPNSAYGY--------LLDLLGKTIDNPIVDLYRKRFPYYNI-VGDPERNTVVFRKSDT 128
            |.|...:|.:|..|        ::||..||..|..       .|..|. ||..:....|.|...:
Zfish   230 QLIIALEPEAASIYCRKLRLHQMVDLGSKTALNGY-------SPTDNAGVGMTQAKEHVRRNRQS 287

  Fly   129 DEFSVEELVAQL---LVKAKQFAQESVQQPITECVLTVPGYFGQAEREALLSAAQL--ANLKVLQ 188
            ..|.||.::.:|   |.:..::.       :.:|        |....:..:...:|  .:||.|.
Zfish   288 RTFLVENVIGELWSELAEGDRYV-------VVDC--------GGGTVDLTVHQIRLPEGHLKELY 337

  Fly   189 LIN--DYAAVALNY-------GVFHRGEINETAQYFLFYDMGAYKTSAAVVSYQLVKDKQTREIN 244
            ..:  .|.::.::|       .:|.:.          |.|....|..||.|...:..:.:.|...
Zfish   338 KASGGPYGSIGIDYEFEKLLCKIFGQD----------FIDQFKIKRPAAWVDLMIAFESRKRAAT 392

  Fly   245 PVVQVLGVGYDRTLGGLEIQLRLR--DYLAQEF------NALKKTKTD---------VTTSPRAL 292
            |         ||: ..|.|.|...  ||. ::|      :||:|:..|         :..||.|:
Zfish   393 P---------DRS-NPLNINLPFSFIDYY-KKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAM 446

  Fly   293 AKLFKEAGRLKNVLSANTEFFAQIENLIEDIDFKLPVTREKLEQLCEDLWPRATKPLEEALASSH 357
            ..|||..  :.:::...||.|.:.|  :.||.|                                
Zfish   447 NALFKPT--IDHIIQHLTELFDRPE--VTDIKF-------------------------------- 475

  Fly   358 LSLDVINQVILFGGGTRVPRVQETIKAVIKQELGKNLNADESATMGAVYKAADLSAGFKVKKFVV 422
                    :.|.||....|.:|:.::.:::......:..|...|                   ::
Zfish   476 --------LFLVGGFAESPLLQQAVQNMLQGRSRIIIPHDVGLT-------------------IL 513

  Fly   423 KDATLFPLQVSFERDPGDGAAVKQVKRALF----ALMNPY------PQKKVITFNKH--TDDFEF 475
            |.|.||.|      ||    ::.:|:|:..    .::|.:      |:|.::.....  ||.|:.
Zfish   514 KGAVLFGL------DP----SIIKVRRSPLTYGVGVLNRFVEGKHPPEKMLVKDGMRWCTDVFDT 568

  Fly   476 YVNYADLDRYSKEEIAALG-----SLNVTKVQLKQVKELLEKSKKELVDNKGIKAYFYLDDSGIF 535
            ::        |.::..|||     |....|...:.:...:..|:||.|.        ::.|.|:.
Zfish   569 FI--------SADQSVALGETVKRSYTPAKPSQQVIVIHVYCSEKESVT--------FITDPGVR 617

  Fly   536 RCTGVEYVYEKQKPEDDADEDSTLSKFGST 565
            :|..::......:......|..||.:||.|
Zfish   618 KCGSLKLDVSGTESPAARREIQTLMQFGDT 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 103/549 (19%)
HYOU1-like_NBD 23..409 CDD:212672 70/375 (19%)
TAF4 <572..>627 CDD:296797
hspa12aXP_017207164.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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