DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and Hspa12b

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_082582.1 Gene:Hspa12b / 72630 MGIID:1919880 Length:685 Species:Mus musculus


Alignment Length:623 Identity:121/623 - (19%)
Similarity:205/623 - (32%) Gaps:233/623 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 YRKRFPYYNIVGDPE--RNTVVFRK------SDTDEFSVEELVA---------QLLVKAKQFAQE 150
            |..|..|:::  |||  |:.:.|.|      |.||.....:|.|         ::...|.:|.:|
Mouse   120 YTARDYYHDL--DPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKKMLALEVFAHALRFFKE 182

  Fly   151 SVQQPI---TEC---------VLTVPGYFGQAEREALLSAAQLANL-------KVLQLINDYAA- 195
            ...|.:   :||         |||||..:.|..::.:..||.||.|       |:|..:...|| 
Mouse   183 HALQELREQSECMLEKGAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALEPEAAS 247

  Fly   196 -----------VALNYGVFHRGEINETAQYFLFYDMGAYKTSAAVVSYQLVKDKQTREINPVVQV 249
                       :.|:.....||.:.|..         :..:|......||.:.:.:|..  :|:.
Mouse   248 VYCRKLRLHQLMDLSSRTAGRGRLGERR---------SIDSSFRHAREQLRRSRHSRTF--LVEA 301

  Fly   250 LGVGY--------DRTL----GGLEIQLRLRDYLAQEFNALKKTKTDVTTSPRALAKLFKEAGRL 302
             |||.        ||.:    ||..:.|.:.. |.|....||              :|:|.:|..
Mouse   302 -GVGELWAEMQEGDRYMVADCGGGTVDLTVHQ-LEQPHGTLK--------------ELYKASGGP 350

  Fly   303 KNVLSANTEFFAQIENLIEDI---DFKLPVTREKLEQLCEDLW----------PRATKP------ 348
            ...:..:..|    |.|:..|   ||.....|::     ...|          .|...|      
Mouse   351 YGAVGVDLAF----EQLLCRIFGEDFIAKFKRQR-----PAAWVDLTIAFEARKRTAGPHRAGAL 406

  Fly   349 -------------------LEEALASS-------------HLSLDVINQVILFGGGTRVPRVQET 381
                               :|.||..|             .:|.:.:|::.           |.|
Mouse   407 NISLPFSFIDFYRKQRGHNVETALRRSSVNLVKWSSQGMLRMSCEAMNELF-----------QPT 460

  Fly   382 IKAVI--------KQEL-GKNL-----NADESATMGAVYKAADLSAGFK------VKKFVVKDAT 426
            :..:|        |.|: |..|     ...|||.:....:.|..:.|.:      |...::|.|.
Mouse   461 VSGIIQHIEMLLAKPEVQGVKLLFLVGGFAESAVLQHAVQEALGTRGLRVVVPHDVGLTILKGAV 525

  Fly   427 LFPLQVSFERDPGDGAAVKQVKRALF----ALMNPY------PQKKVITFNKH--TDDFEFYVNY 479
            ||          |....|.:|:|:..    .::|.:      |:|.::...:.  ||.||.:|  
Mouse   526 LF----------GQAPGVVRVRRSPLTYGVGVLNRFVPGHHPPEKLLVRDGRRWCTDVFERFV-- 578

  Fly   480 ADLDRYSKEEIAALGSLNVTKVQLKQVKELLEKSKKELVDNKGIKAYF-------YLDDSGIFRC 537
                  :.|:..|||.      ::::........::.::    |..|.       ::.|.|:.:|
Mouse   579 ------AAEQSVALGE------EVRRSYCPARPGQRRVL----INLYCCAAEDARFITDPGVRKC 627

  Fly   538 TGVEYVYEKQK-PEDDADEDS-----TLSKFGSTLSKL 569
            ..:....|.:. ||:.....|     ...:||.|..|:
Mouse   628 GALSLELEPEGCPENTGTSPSRREIRAAMQFGDTEIKV 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 121/623 (19%)
HYOU1-like_NBD 23..409 CDD:212672 85/430 (20%)
TAF4 <572..>627 CDD:296797
Hspa12bNP_082582.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50
NBD_sugar-kinase_HSP70_actin 61..529 CDD:302596 92/467 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.