DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and hspa13

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_001082948.1 Gene:hspa13 / 560481 ZFINID:ZDB-GENE-070410-58 Length:438 Species:Danio rerio


Alignment Length:456 Identity:107/456 - (23%)
Similarity:200/456 - (43%) Gaps:70/456 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLSALLAGIALSQ-----GAAVMSVDLGSEWMKVGVVSPGV-PMEIALNRESKRKTPAILAFRD 63
            ::|:.||||....|     ...|:.:|||:.:..|||..||. .:||..:.:.::..|::::|..
Zfish    11 VILALLLAGYLGQQYLPPPKPRVIGLDLGTTFCSVGVFQPGTGEIEIIEDDKGRKSIPSVVSFTL 75

  Fly    64 GTRTIGEDAQTIGIKDPNSAYGYLLDLLGKTIDNPIVDLYRKRFPYYNIVGDPERNTVVFRKSDT 128
            .....|.:.|.:...:|.:........:||..|...::....|:|:          .|:|.....
Zfish    76 TGVFAGHEGQELSDVNPQNTIYDAKRFIGKIFDEETLEKESARYPF----------KVIFNNGSA 130

  Fly   129 D-------EFSV--EELVAQLLVKAKQFAQESVQQPITECVLTVPGYFGQAEREALLSAAQLANL 184
            |       .|:|  |.:.::||:|.::.|::.:..|:.:.|::||..|.:.:|...:.||.||.|
Zfish   131 DFLVNTNSTFTVTPEFIGSRLLLKMRKMAEKQLGVPVEKAVISVPAEFDERQRNYTIRAANLAGL 195

  Fly   185 KVLQLINDYAAVALNYGVFHRGEINETAQYFLFYDMGAYKTSAAVVSYQLVKDKQTREINPVVQV 249
            .||::||:..|.|:.||: |:.|:...    |..|:|......::::.|          ..:...
Zfish   196 DVLRVINEPTAAAMAYGL-HKAEVFNV----LVVDLGGGTLDVSLLNKQ----------GGMFLT 245

  Fly   250 LGVGYDRTLGGLEIQLRLRDY----LAQEFNALKKTKTDVTTSPRALAKLFKEAGRLKNV----L 306
            ..:..:..|||.:...||..|    :.|::......|.|:....:|:     ||.:|...    :
Zfish   246 RAMAGNNQLGGQDFTQRLLQYTTERVRQQYGVPPTLKEDIHLLRQAV-----EAAKLNLTQEPHV 305

  Fly   307 SANTEFFAQIENLI----EDIDFKLPVTREKLEQLCEDLWPRATKPLEEALASSHLSLDVINQVI 367
            ......:.|:....    |.:.|:..:|||..|:|..||:.:...|:|..|...||....:::::
Zfish   306 HLRVPLYLQMTGASGAQEEKVLFEEKLTRETFEELNADLFQKILAPIETVLVEGHLDKQEVDEIV 370

  Fly   368 LFGGGTRVPRVQETIKAVIKQELGKNLNADESATMGAVYKAADLSAGFKVKKFVVKDATLFPLQV 432
            |.||.||:||:::.|.....:|...:::.|.:...|...:|..:...             :||||
Zfish   371 LVGGSTRIPRIRQLISQYFGKEPNTSVDPDLAVVTGVAIQAGIMGGS-------------WPLQV 422

  Fly   433 S 433
            |
Zfish   423 S 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 101/434 (23%)
HYOU1-like_NBD 23..409 CDD:212672 94/407 (23%)
TAF4 <572..>627 CDD:296797
hspa13NP_001082948.1 HSPA13-like_NBD 23..430 CDD:212679 102/444 (23%)
PRK13930 32..409 CDD:237564 95/406 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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