DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and hspa12a.2

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:XP_003198604.1 Gene:hspa12a.2 / 559237 ZFINID:ZDB-GENE-061009-20 Length:571 Species:Danio rerio


Alignment Length:641 Identity:124/641 - (19%)
Similarity:208/641 - (32%) Gaps:245/641 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YGYLLDLLGKTIDNPIVDLYRKRFPY----YNIVGDPERNTV--VFRKSDT-DEFSVE----ELV 137
            |||      .|...|...|:.:...:    |:.:....|:||  ..|||.. :.|.:|    |:.
Zfish    41 YGY------NTFKTPTCILFDEHETFQKFGYDAMMTYTRSTVKSQARKSFLFEHFKMELYDKEIH 99

  Fly   138 AQLLVKAKQFAQ-------------------ESVQQPIT---------ECVLTVPGYFGQAEREA 174
            ..|::.||...|                   |.|::..|         ..|||||..:..|.::.
Zfish   100 RDLMITAKNGGQMKALTVFSESLRYLKDHALEKVKENPTGKTFIASDVTWVLTVPAIWNAAAKQF 164

  Fly   175 LLSAAQLANL--------KVLQLINDYAAVALNYGVFHRGEINETA-----------QYFLFYDM 220
            :..||..|.|        .|..|..:.|::...: :...|.|:|.|           || :..|.
Zfish   165 MREAAIEAGLVIESEPERLVFALEPEAASIYCKH-LPSEGYISEEACRDTLEQKPGTQY-MVVDC 227

  Fly   221 GAYKTSAAVVSYQLVKDKQTREINPVVQVLGVGYDRTLGGLEIQLRLRDYLAQEFN--------- 276
            |.......|  :::|:|.:.:|:|     ...|.|  :||..:..:...:|.:.|:         
Zfish   228 GGGTIDITV--HEVVEDGKLKELN-----AASGND--MGGQTVDRKFISFLKEIFSEKIYNKFEQ 283

  Fly   277 -----ALKKTKTDVTTS-----------PRALAKLFKEAGRLKNVLSANTEFFAQIEN------- 318
                 || |.|.|:..:           |..|.:|.|:...:::       :|..:|.       
Zfish   284 DFPAEAL-KLKYDIALAKSCDQLVLIQCPVTLQELAKKEKAIES-------YFEGVEGAEWDEGS 340

  Fly   319 --LIED-----IDFKLPVTREKLEQL-------------------CEDLWPRATKPLEEALASSH 357
              :.||     .|..|..|.||||::                   |:.|    .|.|:|......
Zfish   341 IIIKEDKLQSFFDESLKTTAEKLEKITSNPELNIEYMLLVGGFAECKIL----KKFLKERFDKCK 401

  Fly   358 LSLDVINQVILFGGGTRVPRVQETIKAVIKQELGKNLNADESATMGAVYKAADLSAGFKVKKFVV 422
            :...|..||::..|..|..:..:.:|                :.|.|:.....:.|.|  .|.:.
Zfish   402 IVCPVEPQVVIIKGAIRYAKQPKVVK----------------SRMSALTYGIRIDAPF--DKVLH 448

  Fly   423 KDATLFP-------LQVSFERDPGDGAAVK--QVKRALFALMNPYPQKKVITFNKHTDD----FE 474
            ||.:.:.       ..|.||.....|.:|.  :|::..|   ||          .||:.    |:
Zfish   449 KDKSNYVNSEGQTYCDVCFETFVRKGESVNCDEVRQFFF---NP----------SHTNQTSAIFQ 500

  Fly   475 FYVNYADLDRYSKEEIAALGSLNVTKVQLKQVKELLEKSKKELVDNKGIKAYFYLD------DSG 533
            |:                  |.|..:||              .:|..|::...:.:      |.|
Zfish   501 FF------------------STNEKQVQ--------------FIDEPGVEPVGFFEVGMPKTDGG 533

  Fly   534 IFRCTGVEYVYEKQKPEDDADEDSTLSKFGSTLSKLFTKEGEEKKDNSEQEEAANA 589
            :.|...:|.                  |||||..|....:.:..:..|.:.:..|:
Zfish   534 LSREIKLEI------------------KFGSTEMKATATDVDSGETTSVKHDFINS 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 124/641 (19%)
HYOU1-like_NBD 23..409 CDD:212672 88/440 (20%)
TAF4 <572..>627 CDD:296797 2/18 (11%)
hspa12a.2XP_003198604.1 HSPA12_like_NBD 6..420 CDD:212671 85/407 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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