DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and hspa12a.3

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_001038346.3 Gene:hspa12a.3 / 559031 ZFINID:ZDB-GENE-030131-8896 Length:571 Species:Danio rerio


Alignment Length:636 Identity:121/636 - (19%)
Similarity:208/636 - (32%) Gaps:211/636 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 KTPAILAF--RDGTRTIGEDA-QTIGIKDPNS--AYGYLLDLLGKTIDNPIVDLYRKRFPYYNIV 113
            |||..:.|  .:..:..|.|| .|.....|.|  ...:|.:...       ::||.|..      
Zfish    47 KTPTCILFDEHETFQKFGYDAMMTYTRSTPKSQARKSFLFEHFK-------MELYDKEI------ 98

  Fly   114 GDPERNTVVFRKSDTDEFSVEELVAQLLVKAKQFAQESVQQPIT---------ECVLTVPGYFGQ 169
               .|:.::..|:. .:.....:.::.|...|..|.|.:::..|         ..|||||..:..
Zfish    99 ---HRDLMITAKNG-GQMKALTVFSESLRYLKDHALEKIKENTTGKTFIASDVTWVLTVPAIWNA 159

  Fly   170 AEREALLSAAQLANL-------KVLQLINDYAAVALNYGVFHRGEINETA-----------QYFL 216
            |.::.:..||..|.|       :::..:...||......:...|.|:|.|           || :
Zfish   160 AAKQFMREAAIEAGLVIESEPERLVFALEPEAASIYCKQLPSEGYISEEACRDTLEQKPGTQY-M 223

  Fly   217 FYDMGAYKTSAAVVSYQLVKDKQTREINPVVQVLGVGYDRTLGGLEIQLRLRDYLAQEFN----- 276
            ..|.|.......|  :::|:|.:.:|:|     ...|.|  :||..:..:...:|.:.|:     
Zfish   224 VVDCGGGTIDITV--HEVVEDGKLKELN-----AASGND--MGGQTVDRKFISFLKEIFSEKIYN 279

  Fly   277 ---------ALKKTKTDVTTS-----------PRALAKLFKEAGRLKNVLSANTEFFAQIEN--- 318
                     || |.|.|:..:           |..|..|.|:...:::       :|..:|.   
Zfish   280 KFEQDFPAEAL-KLKYDIALAKSCDQLVLIQCPVTLQDLAKKEKAIES-------YFEGVEGAEW 336

  Fly   319 ------LIED-----IDFKLPVTREKLEQL-------------------CEDLWPRATKPLEEAL 353
                  :.||     .|..|..|.||||::                   |:.|    .|.|:|..
Zfish   337 DEGSIIIKEDKLQSFFDESLKTTAEKLEKIMSNPELNIEYMLLVGGFAECKIL----KKFLKERF 397

  Fly   354 ASSHLSLDVINQVILFGGGTRVPRVQETIKAVIKQELGKNLNADESATMGAVYKAADLSAGF--- 415
            ....:...|..||::..|..|..:..:.:|                :.|.|:.....:.|.|   
Zfish   398 DKCKIVCPVEPQVVIIKGAIRYAKQPKVVK----------------SRMSALTYGIRIDAPFDKV 446

  Fly   416 --KVKKFVVKDATLFPLQVSFERDPGDGAAVK--QVKRALFALMNPYPQKKVITFNKHTDDFEFY 476
              |.|...|.........|.||.....|.:|.  :|::..|   ||...      |:....|:|:
Zfish   447 LHKGKTSYVNSEGQTYCDVCFETFVRKGESVNCDEVRQFFF---NPSDT------NQTFATFQFF 502

  Fly   477 VNYADLDRYSKEEIAALGSLNVTKVQLKQVKELLEKSKKELVDNKGIKAYFYLDDSGIFRCTGVE 541
                              |.|..:||              .:|..|:::.      |:|: .|: 
Zfish   503 ------------------STNEKQVQ--------------FIDEPGVESV------GVFQ-VGM- 527

  Fly   542 YVYEKQKPEDDADEDSTLS---KFGSTLSKLFTKEGEEKKDNSEQEEAANA 589
                   |:.|......:.   |||||..|....:.:..:..|.:.:..|:
Zfish   528 -------PKTDGGLSREIKLEIKFGSTEMKATATDVDSGETTSVKLDFINS 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 121/636 (19%)
HYOU1-like_NBD 23..409 CDD:212672 85/444 (19%)
TAF4 <572..>627 CDD:296797 2/18 (11%)
hspa12a.3NP_001038346.3 HSPA12_like_NBD 6..420 CDD:212671 82/411 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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