DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2918 and elp2

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:XP_012820102.2 Gene:elp2 / 548516 XenbaseID:XB-GENE-5752362 Length:832 Species:Xenopus tropicalis


Alignment Length:388 Identity:79/388 - (20%)
Similarity:128/388 - (32%) Gaps:127/388 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 SGIFRCTGVEYV--YEKQKPEDDADEDSTLSKFGSTLSKLFTKEGEEKKDNSEQEEAANAGEEPS 594
            :||..|.....:  |:.||       :..:|.......::......:|.|.|.:.|..:.|    
 Frog    34 TGILACATCHSIALYDPQK-------NVVISTLNGHTGRVNCVHWVQKNDCSAETELVSGG---- 87

  Fly   595 KSEDNEKAKEEDASKEQKSEESTKQDTEAKNETIKLVTVKSPVTYESQTQFVVPLVGSAYDQ-SV 658
                ::|.....|.::.|.|:                    ||..|..|: ||..|.:.|.| |.
 Frog    88 ----SDKKVIIWAIEKNKCEQ--------------------PVAAEGHTE-VVNAVHAVYTQRSE 127

  Fly   659 AKLAAINKAEEQRVRLESAFNALEAHIIEVQQKLDEESYAKCATAEEKEKLLAECSTLGEWLYED 723
            .:|..::.|.:..|||....|..    .|..|.|   |:.|....:.....|.  .:|...|...
 Frog   128 NELLIVSAASDCTVRLWLRRNVK----TECLQTL---SFGKGFVLDVCISFLP--GSLVPVLACG 183

  Fly   724 LEDPKAEIYEEKLAQLKKLSNVFLARHWEHEERPEAIKALKGMIDGAEKFLVTGRNL-------- 780
            .:|.:..:|        .|.|       |..|:.:.:...:..|.|.| :.|||:||        
 Frog   184 ADDSRIHLY--------VLQN-------EQFEKTQVLHGHEDWIRGVE-WAVTGQNLFLASCAQD 232

  Fly   781 ------------------TKDTN-----------PEKDVFTQVEIDTLDKVIT-ETNA-----WL 810
                              |:|.|           .|||..|...: ||:.|:| ..|:     | 
 Frog   233 CLIRIWKIFRKTAKENSKTEDENSIKLKENIFKVKEKDTETSYAV-TLETVLTGHENSIYAVHW- 295

  Fly   811 KTETAAQKKLAKNADIRLTVKDITDKMSLLDREV-KYLVNKIKIWKPKVKPAAEKEKKKEEEV 872
                  |...:::.       .|...||||...: |.::    :|:|..:.....|:.:..||
 Frog   296 ------QPSFSRDG-------SIVQPMSLLSASMDKTMI----LWEPDEESGVWLEQVRVGEV 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 16/94 (17%)
HYOU1-like_NBD 23..409 CDD:212672
TAF4 <572..>627 CDD:296797 9/54 (17%)
elp2XP_012820102.2 WD40 repeat 28..61 CDD:293791 7/33 (21%)
WD40 56..419 CDD:238121 73/359 (20%)
WD40 repeat 67..110 CDD:293791 11/70 (16%)
WD40 repeat 126..158 CDD:293791 10/38 (26%)
WD40 repeat 164..206 CDD:293791 9/58 (16%)
WD40 repeat 212..284 CDD:293791 18/73 (25%)
WD40 repeat 290..323 CDD:293791 8/50 (16%)
WD40 repeat 349..388 CDD:293791
WD40 repeat 395..419 CDD:293791
WD40 repeat 445..496 CDD:293791
WD40 repeat 504..548 CDD:293791
WD40 <563..826 CDD:421866
WD40 repeat 574..616 CDD:293791
WD40 repeat 622..672 CDD:293791
WD40 repeat 677..719 CDD:293791
WD40 repeat 732..765 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.