DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2918 and Hspa12b

DIOPT Version :9

Sequence 1:NP_001162645.1 Gene:CG2918 / 31215 FlyBaseID:FBgn0023529 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_001381945.1 Gene:Hspa12b / 311427 RGDID:1312004 Length:685 Species:Rattus norvegicus


Alignment Length:628 Identity:121/628 - (19%)
Similarity:204/628 - (32%) Gaps:243/628 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 YRKRFPYYNIVGDPE--RNTVVFRK------SDTDEFSVEELVA---------QLLVKAKQFAQE 150
            |..|..|:::  |||  |:.:.|.|      |.||.....:|.|         ::...|.:|.:|
  Rat   120 YTARDYYHDL--DPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKKMLALEVFAHALRFFKE 182

  Fly   151 SVQQPI---TEC---------VLTVPGYFGQAEREALLSAAQLANL-------KVLQLINDYAAV 196
            ...|.:   :||         |||||..:.|..::.:..||.||.|       |:|..:...|| 
  Rat   183 HALQELREQSECMLEKDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALEPEAA- 246

  Fly   197 ALNYGVFHR-----------------GEINETAQYFLFYDMGAYKTSAAVVSYQLVKDKQTREIN 244
                .|:.|                 |.:.|..         :..:|......||.:.:.:|.. 
  Rat   247 ----SVYCRKLRLHQLMDLSSRTAGGGRLGERR---------SIDSSFRHAREQLRRSRHSRTF- 297

  Fly   245 PVVQVLGVGY--------DRTL----GGLEIQLRLRDYLAQEFNALKKTKTDVTTSPRALAKLFK 297
             :|: .|||.        ||.:    ||..:.|.:.. |.|....||              :|:|
  Rat   298 -LVE-SGVGELWSEMQEGDRYMVADCGGGTVDLTVHQ-LEQPHGTLK--------------ELYK 345

  Fly   298 EAGRLKNVLSANTEFFAQIENLIEDI---DFKLPVTREKLEQLCEDLW----------PRATKP- 348
            .:|.....:..:..|    |.|:..|   ||.....|::     ...|          .|...| 
  Rat   346 ASGGPYGAVGVDLAF----EQLLCRIFGEDFIAKFKRQR-----PAAWVDLTIAFEARKRTAGPH 401

  Fly   349 ------------------------LEEALASS-------------HLSLDVINQVILFGGGTRVP 376
                                    :|.||..|             .:|.:.:|::.         
  Rat   402 RAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMNELF--------- 457

  Fly   377 RVQETIKAVI--------KQEL-GKNL-----NADESATMGAVYKAADLSAGFK------VKKFV 421
              |.|:..:|        |.|: |..|     ...|||.:....:.|..:.|.:      |...:
  Rat   458 --QPTVSGIIQHIEMLLAKPEVQGVKLLFLVGGFAESAVLQHAVQEALGNRGLRVVVPHDVGLTI 520

  Fly   422 VKDATLFPLQVSFERDPGDGAAVKQVKRALF----ALMNPY------PQKKVITFNKH--TDDFE 474
            :|.|.||          |....|.:|:|:..    .::|.:      |:|.::...:.  ||.||
  Rat   521 LKGAVLF----------GQAPGVVRVRRSPLTYGVGVLNRFVPGHHPPEKLLVRDGRRWCTDVFE 575

  Fly   475 FYVNYADLDRYSKEEIAALGSLNVTKVQLKQVKELLEKSKKELVDNKGIKAYF-------YLDDS 532
            .:|        :.|:..|||.      ::::........::.::    |..|.       ::.|.
  Rat   576 RFV--------AAEQSVALGE------EVRRSYCPARPGQRRVL----INLYCCAAEDARFITDP 622

  Fly   533 GIFRCTGVEYVYEKQ-KPEDDADEDS-----TLSKFGSTLSKL 569
            |:.:|..:....|.: .||:.....|     ...:||.|..|:
  Rat   623 GVRKCGALSLELEPEGSPENTGTSPSRREIRAAMQFGDTEIKV 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2918NP_001162645.1 HSP70 22..625 CDD:278441 121/628 (19%)
HYOU1-like_NBD 23..409 CDD:212672 85/435 (20%)
TAF4 <572..>627 CDD:296797
Hspa12bNP_001381945.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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