DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2924 and ube2q2

DIOPT Version :9

Sequence 1:NP_001284819.1 Gene:CG2924 / 31214 FlyBaseID:FBgn0023528 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001315128.1 Gene:ube2q2 / 406260 ZFINID:ZDB-GENE-040426-1919 Length:379 Species:Danio rerio


Alignment Length:398 Identity:215/398 - (54%)
Similarity:290/398 - (72%) Gaps:31/398 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LKQEIKTLEKIFPKNHERFQILNSSVDELLCRFIDKNGKRYDIHANITETYPSSPPVWFAESEET 71
            ||.|:|.||.||..|||||:|::...|||.|:|.....|...||.||||:|||:||:||.:|::.
Zfish     6 LKAELKFLESIFDPNHERFRIIDWKPDELSCQFNVTGEKLLIIHCNITESYPSTPPIWFVDSDDP 70

  Fly    72 SVTNAVQILSNTNGRDNHVINQVGILLRELCRLHNVPLPPDIDNLALPLQTPPPSASPLRCEQRP 136
            |:|..::.|.:....:..::.|:..|:.:||||:|:|..||::.|..||     .|.|:..::: 
Zfish    71 SLTEVLERLEDVRKGNALLLQQLKRLICDLCRLYNLPQHPDVEMLDQPL-----PAGPISNDKK- 129

  Fly   137 GGGGAGGGGGPHG-NEETDSDQEEIEDPIGESEQESEGDEDLPLEMDDVRSTSKKDD-MEVEHLA 199
                       || .:|..|::||.|:   .:||:.|..:...::.:.|.....:|| :|.|:||
Zfish   130 -----------HGTTDEVTSEEEEEEE---MAEQDIEDLDHYEMKEEPVDGKKSEDDGIEKENLA 180

  Fly   200 TLEKLRQSQRQDYL-----KGSVSGSVQATDRLMKELRDIYRSDAFKKNMYSIELVNESIYEWNI 259
            .|||:|::||||:|     .|:|||||||:||||||||:||||.::|..:||:||||:|:|||::
Zfish   181 ILEKIRKNQRQDHLNVSVHSGAVSGSVQASDRLMKELREIYRSQSYKTGIYSVELVNDSLYEWHV 245

  Fly   260 RLKSVDPDSPLHSDLQMLKEKEGKDSILLNILFKETYPFEPPFVRVVHPIISGGYVLIGGAICME 324
            :|::||||||||||||:||||||.|.||||..:|:.:||:|||||||.|::||||||.|||:|||
Zfish   246 KLRTVDPDSPLHSDLQVLKEKEGMDYILLNFSYKDNFPFDPPFVRVVSPVLSGGYVLGGGALCME 310

  Fly   325 LLTKQGWSSAYTVEAVIMQIAATLVKGKARIQFGATKALTQGQYSLARAQQSFKSLVQIHEKNGW 389
            |||||||||||::|:|||||.|||||||||:||||.|    .||:|||||||:||||||||||||
Zfish   311 LLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANK----NQYNLARAQQSYKSLVQIHEKNGW 371

  Fly   390 FTPPKEDG 397
            :|||||||
Zfish   372 YTPPKEDG 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2924NP_001284819.1 UBCc 224..>349 CDD:238117 89/124 (72%)
ube2q2NP_001315128.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2424
eggNOG 1 0.900 - - E1_KOG0897
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 413 1.000 Inparanoid score I1814
OMA 1 1.010 - - QHG49199
OrthoDB 1 1.010 - - D1214134at2759
OrthoFinder 1 1.000 - - FOG0003048
OrthoInspector 1 1.000 - - otm26604
orthoMCL 1 0.900 - - OOG6_104870
Panther 1 1.100 - - LDO PTHR24068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4130
SonicParanoid 1 1.000 - - X2030
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

Return to query results.
Submit another query.