DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2924 and ubc-25

DIOPT Version :9

Sequence 1:NP_001284819.1 Gene:CG2924 / 31214 FlyBaseID:FBgn0023528 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_492764.2 Gene:ubc-25 / 172941 WormBaseID:WBGene00006720 Length:387 Species:Caenorhabditis elegans


Alignment Length:414 Identity:193/414 - (46%)
Similarity:265/414 - (64%) Gaps:44/414 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MACLNTLKQEIKTLEKIFPKNHERFQILNSSVDELLCRFIDKNGKRYDIHANITETYPSSPPVWF 65
            ||||..||::|:.|||:|||||.|||||::|||||..:||:...|...:.|||.|.||..||:||
 Worm     1 MACLRKLKEDIQVLEKLFPKNHNRFQILSASVDELSMKFINAENKGIIVTANIQENYPRQPPIWF 65

  Fly    66 AESEETSVTN-AVQILSNTNGRDNHVINQVGILLRELCRLHNVPLPPDIDNLALPLQTPPPSASP 129
            :||::..|.. ::|.|:.|....| :::||..|:.:||..:|:.:|.::          |..|.|
 Worm    66 SESDDVPVIGMSLQRLTETEESTN-ILHQVHRLVSDLCSFYNLQMPCEL----------PQIAPP 119

  Fly   130 LRCEQRPGGGG--------------AGGGGGPHGNEETDSDQEEIEDPIGESEQESEGDEDLPLE 180
            :|.:...|.|.              ||.|       |.|.|.||.||     :::::||.:: :|
 Worm   120 VRDDIDEGRGSDISDTTSEPIDDDMAGDG-------EVDDDDEEEED-----DEDADGDIEI-VE 171

  Fly   181 MDDVRSTSKKD-DMEVEHLATLEKLRQSQRQDYLKGSVSGSVQATDRLMKELRDIYRSDAFKKNM 244
            |.:...||:.| .:..|.|..|:|:.:..||.:|.|.|.||:.||||||||:|||:||:.||..:
 Worm   172 MAEEDPTSQHDVGVSKEGLDMLDKVSKINRQQHLDGKVQGSITATDRLMKEIRDIHRSEHFKNGI 236

  Fly   245 YSIEL-VNESIYEWNIRLKSVDPDSPLHSDLQMLKEKEGKDSILLNILFKETYPFEPPFVRVVHP 308
            |:.|| ..|::|:|.|:|..||.||||..|::.||:...:|.:|.:..|.|.:|.:|||||||.|
 Worm   237 YTFELEKEENLYQWWIKLHKVDEDSPLFEDMKKLKKDHNQDHLLFSFTFNEKFPCDPPFVRVVAP 301

  Fly   309 IISGGYVLIGGAICMELLTKQGWSSAYTVEAVIMQIAATLVKGKARIQFGATKALTQGQYSLARA 373
            .|:.|:||.||||||||||||||||||::|:.|:|||||||||:|||.|.|....|   ||:|||
 Worm   302 HINQGFVLGGGAICMELLTKQGWSSAYSIESCILQIAATLVKGRARISFDAKHTST---YSMARA 363

  Fly   374 QQSFKSLVQIHEKNGWFTPPKEDG 397
            |||||||.|||.|:||:||||.:|
 Worm   364 QQSFKSLQQIHAKSGWYTPPKTEG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2924NP_001284819.1 UBCc 224..>349 CDD:238117 73/125 (58%)
ubc-25NP_492764.2 UBCc 218..376 CDD:214562 96/160 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166780
Domainoid 1 1.000 196 1.000 Domainoid score I1841
eggNOG 1 0.900 - - E1_KOG0897
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45455
Inparanoid 1 1.050 340 1.000 Inparanoid score I1397
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49199
OrthoDB 1 1.010 - - D1214134at2759
OrthoFinder 1 1.000 - - FOG0003048
OrthoInspector 1 1.000 - - oto19178
orthoMCL 1 0.900 - - OOG6_104870
Panther 1 1.100 - - LDO PTHR24068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4130
SonicParanoid 1 1.000 - - X2030
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

Return to query results.
Submit another query.