DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2924 and LOC120099227

DIOPT Version :10

Sequence 1:NP_569994.1 Gene:CG2924 / 31214 FlyBaseID:FBgn0023528 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_038956205.1 Gene:LOC120099227 / 120099227 RGDID:41199544 Length:155 Species:Rattus norvegicus


Alignment Length:133 Identity:38/133 - (28%)
Similarity:59/133 - (44%) Gaps:31/133 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 ATDRLMKELRDIYRSDAFKKN---MYSIELVNESIYEWNIRLKSVDPDSPLHSDLQMLKEKEGKD 284
            |..|:.|||      .||.::   ..|...|.|:::.|...:...: |||....:          
  Rat    10 ALKRIQKEL------VAFSQDPPAQCSAGPVAENLFHWQATIMGPE-DSPYQGGV---------- 57

  Fly   285 SILLNILFKETYPFEPPFV----RVVHPIISGGYVLIGGAICMELLTKQGWSSAYTVEAVIMQIA 345
             ..|::.|...|||.||.|    |:.||.||.     .|:||:::|..: ||.|.|:..|::.|.
  Rat    58 -FFLSVHFPSNYPFRPPKVSFITRIYHPNISK-----NGSICLDILNSE-WSPALTISKVLLSIC 115

  Fly   346 ATL 348
            :.|
  Rat   116 SLL 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2924NP_569994.1 UBCc_UBE2Q 225..384 CDD:467422 37/131 (28%)
LOC120099227XP_038956205.1 UBCc_UBE2D 11..153 CDD:467412 37/132 (28%)

Return to query results.
Submit another query.