DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG3071 and AT2G47790

DIOPT Version :9

Sequence 1:	NP_569993.1	Gene:	CG3071 / 31213	FlyBaseID:	FBgn0023527	Length:	535	Species:	Drosophila melanogaster
Sequence 2:	NP_566111.1	Gene:	AT2G47790 / 819391	AraportID:	AT2G47790	Length:	392	Species:	Arabidopsis thaliana

Alignment Length:	168	Identity:	38/168 - (22%)
Similarity:	69/168 - (41%)	Gaps:	9/168 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    63 VQIYNLVTMLVVKNLSRFQKTAYGATFRQDG----RLLAAGDEEGHVKLFDTTS-RNILRLFKGH 122
            |::|:.||............|.....|..|.    .:|.:...:|.::.:||.| :.:.|:..|:
plant    65 VKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGN 129

  Fly   123 TAPVHRTFFTADKLQLASFGDDKSVRLWDVANEKVVQTYEDTHTDYVRAGAMHPQAGHMFVSGGY 187
            ...:....:......|.:.|..:.|.|||..|.|.|...|::|.|.|......|...:..:|...
plant   130 DQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVHFVPNKPNKLLSASV 194

  Fly   188 DGKIKLYDTRA----ETAVQRTLDHGAPVESMLFLPNG 221
            ||.|.|::|..    :..::..::.|..:..:.||.:|
plant   195 DGLICLFNTEGDINDDDHLESVINVGTSIGKIGFLGDG 232

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3071	NP_569993.1	WD40	<26..283	CDD:225201	38/168 (23%)
		WD40 repeat	87..121	CDD:293791	8/38 (21%)
		WD40	89..318	CDD:238121	33/142 (23%)
		WD40 repeat	126..162	CDD:293791	9/35 (26%)
		WD40 repeat	170..206	CDD:293791	7/39 (18%)
		WD40 repeat	212..247	CDD:293791	3/10 (30%)
		WD40 repeat	254..288	CDD:293791
		WD40 repeat	295..318	CDD:293791
		UTP15_C	352..494	CDD:286472
AT2G47790	NP_566111.1	WD40	<41..275	CDD:225201	38/168 (23%)
		WD40 repeat	43..81	CDD:293791	4/15 (27%)
		WD40 repeat	87..128	CDD:293791	8/40 (20%)
		WD40 repeat	133..169	CDD:293791	9/35 (26%)
		WD40 repeat	177..210	CDD:293791	7/32 (22%)
		WD40 repeat	217..261	CDD:293791	4/16 (25%)
		WD40 repeat	269..321	CDD:293791
		WD40 repeat	328..358	CDD:293791
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910