DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3071 and utp15

DIOPT Version :10

Sequence 1:NP_569993.1 Gene:CG3071 / 31213 FlyBaseID:FBgn0023527 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_955998.1 Gene:utp15 / 325106 ZFINID:ZDB-GENE-030131-3831 Length:517 Species:Danio rerio


Alignment Length:509 Identity:196/509 - (38%)
Similarity:292/509 - (57%) Gaps:14/509 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SFLPLNTRRFRQRAQVETPDTVYWDRLAKPELLKEHNTIDYLDFSPSDPDNFVVTCSVRVQIYNL 68
            ||.|.....:.:..:..|.:|:||.....|..:||...:..:||||..|.|:.||.|.||.||.|
Zfish     3 SFKPTKVLSYPKLGEKVTEETLYWKNYKPPVQIKEFGAVSKIDFSPLPPHNYAVTASTRVHIYGL 67

  Fly    69 VTMLVVKNLSRFQKTAYGATFRQDGRLLAAGDEEGHVKLFDTTSRNILRLFKGHTAPVHRTFFTA 133
            .:...::|.:||..||||.:||.||:||.||.|||.::|||...|..||.||||:..||.|.|.:
Zfish    68 HSQEPIRNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVSLRQFKGHSKAVHATSFLS 132

  Fly   134 DKLQLASFGDDKSVRLWDVANEKVVQTYEDTHTDYVRAGAMHPQAGHMFVSGGYDGKIKLYDTRA 198
            |..::.|..||.:.|:||||:...:.:..: ||||:||.|.......:||:|.||..:|::|.|:
Zfish   133 DGFRVLSGSDDLTCRVWDVASAVELSSITE-HTDYIRAIAPSKLNPDVFVTGSYDHTVKMFDVRS 196

  Fly   199 ETAVQRTLDHGAPVESMLFLPNGSIFVSAGGSQVRVWDLISGCRLLTMMSQHHKTVTCLRLGSDG 263
            ..:|. |:.||.|||.:|..|:.::.||.||..|:||||:.|.:.|..:..|||||||..| |..
Zfish   197 GNSVM-TMQHGQPVECVLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHKTVTCACL-SSS 259

  Fly   264 RRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAVVSMAVADGDQAVVAGMVDGLVSIR-RMMVDSKP 327
            .:||:..||||||:|: |:||.||.....::::|:|||..|:||..||.:|::||| |...:.|.
Zfish   260 NKLLTASLDRHVKVYN-SSYKVVHNFDCASSILSLAVAPDDEAVAVGMTNGVLSIRHRKHKEEKE 323

  Fly   328 SHLKKIRADRARKYFVSTKRTNNTQE---VDHTIKDHVKGPGLKSYDVHLRQFNHKKALDDVMNA 389
            :...:.:...:.::||..|.....|:   |...::.|     |:.||..|::|...||||..:..
Zfish   324 ALTGRRKRGPSYRFFVKGKNFVPRQDDFLVSKPVRQH-----LQKYDKQLKRFEVSKALDTALET 383

  Fly   390 QKMQYQPELIVAVITDLLHRGSLGKALTGRHEAALVRFIDFICNHLGEVRFMRPLMMAASTVLDV 454
            .....:||:.||||.:|..||:|..||.||.|.:|.:.::|:..|:.:.||.|||:.....|||:
Zfish   384 WTRTTKPEVTVAVIMELNRRGTLKNALAGRDEVSLTKILNFLLKHITDPRFSRPLLTVGDIVLDL 448

  Fly   455 FEQRLVAYSQKLMKALQRLSLAMQEEVRLTAELMRMKGAVDMLIGISMDNSEVA 508
            ::| ::..|..:.:.||||...:..|..|..||:::.|.:|.|....|...|||
Zfish   449 YQQ-VIPQSPVVERLLQRLYEILGREAELQQELLQVLGILDTLFASLMPRKEVA 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3071NP_569993.1 WD40 4..316 CDD:441893 133/311 (43%)
WD40 repeat 87..121 CDD:293791 18/33 (55%)
WD40 repeat 126..162 CDD:293791 13/35 (37%)
WD40 repeat 170..206 CDD:293791 12/35 (34%)
WD40 repeat 212..247 CDD:293791 15/34 (44%)
WD40 repeat 254..288 CDD:293791 18/33 (55%)
WD40 repeat 295..318 CDD:293791 10/22 (45%)
UTP15_C 349..497 CDD:462782 50/150 (33%)
utp15NP_955998.1 WD 1 36..75 16/38 (42%)
WD40 39..327 CDD:441893 128/291 (44%)
WD40 repeat 41..78 CDD:293791 15/36 (42%)
WD 2 78..117 22/38 (58%)
WD40 repeat 84..120 CDD:293791 20/35 (57%)
WD 3 120..159 15/38 (39%)
WD40 repeat 125..162 CDD:293791 13/36 (36%)
WD 4 162..202 16/41 (39%)
WD40 repeat 168..203 CDD:293791 12/35 (34%)
WD 5 204..242 17/37 (46%)
WD40 repeat 209..245 CDD:293791 15/35 (43%)
WD 6 246..285 23/40 (58%)
WD40 repeat 251..283 CDD:293791 18/33 (55%)
WD 7 287..324 15/36 (42%)
WD40 repeat 290..313 CDD:293791 10/22 (45%)
UTP15_C 343..490 CDD:462782 50/152 (33%)

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