DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3071 and Y23H5B.5

DIOPT Version :10

Sequence 1:NP_569993.1 Gene:CG3071 / 31213 FlyBaseID:FBgn0023527 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_490990.2 Gene:Y23H5B.5 / 171811 WormBaseID:WBGene00021276 Length:561 Species:Caenorhabditis elegans


Alignment Length:560 Identity:148/560 - (26%)
Similarity:270/560 - (48%) Gaps:50/560 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQNSFLPLNTRRFRQRAQVET----PDTVYWDRLAKPELLKEHNTIDYLDFSPSDPDNFVVTCSV 61
            |...:||  ..:|..|.| ||    .|.:||.|:.:..:.:|...:..:..||..|.:...|.||
 Worm     1 MAQPYLP--AEKFLSRKQ-ETILLDEDVIYWKRMQQLTVFQEPAVVSSVRISPKKPYHVATTSSV 62

  Fly    62 RVQIYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAGDEEGHVKLFDT-----TSRNILRLFKG 121
            |:.:|:.|....:...|||:|......||.||||||.|.:||.|::||.     :|:..||:.:.
 Worm    63 RLTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGGDEGKVRIFDVEKTTGSSKVALRVMQA 127

  Fly   122 HTAPVHRTFFTADKLQLASFGDDKSVRLWDVANE----KVVQTYE-DTHTDYVRAGAMHPQAGHM 181
            ..:.|....|:.....:.|..||..::.:.||:.    ..|...| ..|.|.:|.||:.....|:
 Worm   128 SQSTVKSVHFSPRGDTVFSMADDGKIKQYRVADTAYGVNAVPIIEIQAHEDAIRCGAVSSINDHI 192

  Fly   182 FVSGGYDGKIKLYDTRA-ETAVQRTLDHGAPVESMLFLPNGSIFVSAGGSQVRVWDLISGCRLLT 245
            .::||||.|::|:|.|: |.:::...:|  ||||:||||...:..:|.|..|::||..:| |.||
 Worm   193 VLTGGYDHKVRLWDIRSKEKSLELDCEH--PVESVLFLPGEQLIATAAGPIVKIWDTTTG-RQLT 254

  Fly   246 MMSQHHKTVTCLRLGSDGRRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAVVSMAVADGDQAVVAG 310
            .:..|:||||.|||.::...|||.|:||.|..:..:.|..:::.:.|:.|:.:.|:..||.:..|
 Worm   255 ALQAHYKTVTSLRLATNSTCLLSAGIDRRVNAFRTTNYSLINSWSMPSPVLDIDVSRDDQTMAIG 319

  Fly   311 MVDGLVSIRRMMVDSKPSHLKKIRADRARKYFVST--------KRTNNTQEVDHTIK--DHVKGP 365
            |.:.|...||..:..:.:....|...|:   .:.|        ::..:.|:||...|  |.:|.|
 Worm   320 MGNLLALYRRAEIKKEATASAAIEDKRS---LIRTSAPPVKLVEKDRDMQKVDVVAKNADKLKIP 381

  Fly   366 GLKSYDVHLRQFNHKKALDDVMNAQKMQYQPELIVAVITDLLHRGSLGKALTGRHEAALVRFIDF 430
            .:   |..|..|.|...:..:...:........:|:.:..::.||::.:||.|:..:.....:.|
 Worm   382 KI---DGMLSNFKHAAVIKLLFGGKFRSAMDTAVVSYLRVIVMRGAIHRALAGQERSVQKNILVF 443

  Fly   431 ICNHLGEVRFMRPLMMAASTVLDVFEQRLVAYSQKLMKALQRLSLAMQEEVRLTAELMRMKGAVD 495
            :.::|.:.::...|....:...||:  .|....:.::|.:|.|..::..|:.:...:..:.|::|
 Worm   444 LNHNLYKAQYFSTLKEVVNAFFDVY--ALEKLDKDVVKHVQSLRGSLGRELEVQKMISSLIGSID 506

  Fly   496 MLIGIS-----------MDNSEVAHKPTYVETKTPKMHPS 524
            :::..:           :::::|..:||.......::.||
 Worm   507 LIVSTTKMNVKSSSTALIEDNDVFGEPTIRARDLDELKPS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3071NP_569993.1 WD40 4..316 CDD:441893 107/326 (33%)
WD40 repeat 87..121 CDD:293791 17/38 (45%)
WD40 repeat 126..162 CDD:293791 8/39 (21%)
WD40 repeat 170..206 CDD:293791 13/36 (36%)
WD40 repeat 212..247 CDD:293791 16/34 (47%)
WD40 repeat 254..288 CDD:293791 13/33 (39%)
WD40 repeat 295..318 CDD:293791 7/22 (32%)
UTP15_C 349..497 CDD:462782 29/149 (19%)
Y23H5B.5NP_490990.2 WD40 32..319 CDD:441893 94/289 (33%)
WD40 repeat 44..80 CDD:293791 9/35 (26%)
WD40 repeat 85..126 CDD:293791 17/40 (43%)
WD40 repeat 133..174 CDD:293791 8/40 (20%)
WD40 repeat 180..217 CDD:293791 13/36 (36%)
WD40 repeat 222..257 CDD:293791 16/35 (46%)
UTP15_C 362..508 CDD:462782 29/150 (19%)

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