DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment temp and Ptar1

DIOPT Version :9

Sequence 1:	NP_001284818.1	Gene:	temp / 31212	FlyBaseID:	FBgn0027296	Length:	398	Species:	Drosophila melanogaster
Sequence 2:	NP_001099230.2	Gene:	Ptar1 / 286972	RGDID:	708369	Length:	425	Species:	Rattus norvegicus

Alignment Length:	382	Identity:	114/382 - (29%)
Similarity:	168/382 - (43%)	Gaps:	88/382 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MEEERNEKKVLCEKIIRDINAVFLKDQDLASFEIIP-KEANCNKSPVVHVEHNLGLESWCAQHVY 64
            |.|...|..||.:::::||...|.::..:....:|| .||..|:||:|.||:.||:||||.:.:.
  Rat     1 MAETNEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYNRSPIVLVENKLGVESWCVKFLL 65

  Fly    65 DHAHRTLISHRRQTTAQQLRTLQQQQQSDSLAKYLNVALLINPDVTTFWHIRRQLVQKNRLSINK 129
            .:.|..|:.:         ||.:|....|.|.......||:|||.||.|::|::|:....||..|
  Rat    66 PYVHNKLLLY---------RTRKQWLHKDELIDVTCTLLLLNPDFTTAWNVRKELILSGTLSPVK 121

  Fly   130 ELQFSALVLSIKPKSNEAFAYRRWLYSFQSADAIDWPN---------------------EIGICE 173
            :|....|.|:..|||.|.:.:|||:.. |.:.....|:                     |:.:|.
  Rat   122 DLHLGKLALTKFPKSPETWIHRRWVLQ-QLSQETSLPSSVAKGSLGVVPAERTQRIIQEEMEVCS 185

  Fly   174 RAADRCASNYHAWSHRQWILQNGPCL----LQSELLRTEKFMRKHISDYSCYHYRQVLLSRAYEL 234
            .||.|..|||:|||||.|:|||...|    |..||..|:.:...|:||:|.:||||.||
  Rat   186 EAAGRYPSNYNAWSHRIWVLQNVAKLDLKILLDELSSTKHWASVHVSDHSGFHYRQFLL------ 244

  Fly   235 SFALPKDSGASGSSTLASLQHLMTSYGLECE--------ANAEDLLGLLLPHVDLSSVSKQRLIS 291
                 |...:..::..|..||    ..|:||        |:||:           .|||..:|:.
  Rat   245 -----KSLISQTTTDNAVPQH----NSLKCEPKEAAAAAASAEE-----------PSVSLPQLLE 289

  Fly   292 FLYCCNVAANDMRLCAEQRLMYGSRDCFELHRRAALKFIVEQCVRLQMGLPNGQLLP 348
                     .::..|.:....|...:....|||        ....||..| ||:|.|
  Rat   290 ---------EEVEFCTDLIDSYPGHETLWCHRR--------HVFYLQHHL-NGRLPP 328

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
temp	NP_001284818.1	PPTA	168..195	CDD:279565	15/26 (58%)
Ptar1	NP_001099230.2	PLN02789	82..346	CDD:215423	85/292 (29%)
Ptar1	NP_001099230.2	PPTA	180..207	CDD:279565	15/26 (58%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335692
Domainoid	1	1.000	81	1.000	Domainoid score	I8341
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	144	1.000	Inparanoid score	I4360
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1527547at2759
OrthoFinder	1	1.000	-	-		FOG0007269
OrthoInspector	1	1.000	-	-		oto96942
orthoMCL	1	0.900	-	-		OOG6_104942
Panther	1	1.100	-	-	LDO	PTHR11129
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X5374
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.860