DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3191 and ctg-2

DIOPT Version :9

Sequence 1:NP_001245486.2 Gene:CG3191 / 31209 FlyBaseID:FBgn0023525 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001254156.1 Gene:ctg-2 / 174360 WormBaseID:WBGene00011756 Length:408 Species:Caenorhabditis elegans


Alignment Length:320 Identity:67/320 - (20%)
Similarity:116/320 - (36%) Gaps:92/320 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TSEQLQREQDSDTSEQAVRKQERDLKELLEWFRQNDKLPKEIDPLLLRRFYQCMFGDVEETRKLI 78
            |.::|..|:.|.::.:......:.|.||.:...:..:|.||.|            .|....|.||
 Worm     4 TKKRLSGERMSTSTGEITESDRKLLDELRKRIHKELELVKEYD------------DDFSLMRWLI 56

  Fly    79 -----------EVNYALRNRHPHLFIKRDPLDADSKRTFDYADILPLPGLTP--DKCKVSLYCFR 130
                       ::.::||..|              ....|..|:..|..:..  |.|.|.|   |
 Worm    57 GWDRKIDVVVPKIKFSLRAIH--------------ALGLDQEDLSTLEKVAQKCDDCSVPL---R 104

  Fly   131 EFEAS--KMHHTEDTRAFFMVS--DCRFVTP----DDLAKPDVL-SEGEVQ-------------- 172
            ....|  .:.|..:..:..|:.  |...:.|    .||.:..:. |||.:|              
 Worm   105 YLPGSLIGLDHENNVVSLQMIGHLDAAGLMPATRNSDLYRMRIAESEGVMQIIRKMEKEQGKPLG 169

  Fly   173 ---IFDMKGTTMRHISRLTISTLRAYIKFLQLAFPVRLRAIHMINCPTYLDRIVSVVKPFISDEV 234
               |||:.|.:|..|....:..:...:..||..||..:|.|.::|.||::..:.|::.|.::.:.
 Worm   170 TSVIFDLDGLSMVQIDLAALKVVTTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCLAKQT 234

  Fly   235 FKLIRF-------HTQSINTLYEFVPREMLPEEYGGGAGSLEALRTHTQKALVEHRDYLM 287
            .:.::.       |      |.|.:..|:|.|.:||           |:||..|:.:..|
 Worm   235 QQKVKILGNDWKQH------LKENIGEEVLFERWGG-----------TRKAETEYGNVRM 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3191NP_001245486.2 SEC14 114..263 CDD:238099 40/183 (22%)
ctg-2NP_001254156.1 SEC14 98..267 CDD:214706 41/188 (22%)
EMP24_GP25L 331..>405 CDD:279450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.