DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or2a and Or56a

DIOPT Version :10

Sequence 1:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:447 Identity:89/447 - (19%)
Similarity:170/447 - (38%) Gaps:106/447 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EDFKLNTHSAVYYHWRVWELTGLMRPPGVSSLLYVVYSITVNLVVTVLFPLSLLARLLFTTNMAG 69
            ||....||.. |:.|..:..:.....|.:|.:...:.:.::.|...:     :|||:.  .....
  Fly    15 EDPIFGTHLR-YFQWYGYVASKDQNRPLLSLIRCTILTASIWLSCAL-----MLARVF--RGYEN 71

  Fly    70 LCENLTITITDI---VANLKFANVYMVRKQLHEIRSLLRLMDARARLVGDPEEISALRKEVNIA- 130
            |.:..|...|.:   ..::...|.|:   |..::.||||:  |.:.:.....|......|:.:| 
  Fly    72 LNDGATSYATAVQYFAVSIAMFNAYV---QRDKVISLLRV--AHSDIQNLMHEADNREMELLVAT 131

  Fly   131 QGTFRTFASIFVFGTTLS-------CVRVVVRPDRELLYP-AWFGVDWMHSTRNYVLINIYQLF- 186
            |...||...:....:.::       |:.      |.|..| :.|.|..:.....:.:: ::||| 
  Fly   132 QAYTRTITLLIWIPSVIAGLMAYSDCIY------RSLFLPKSVFNVPAVRRGEEHPIL-LFQLFP 189

  Fly   187 -------------------GLIVQAIQNCASDSYPPAFLCLLTGHMRALELRVRRIGCRTEKSN- 231
                               ||.:.||         |.:...:|..|:.:.|:::.:..|.|:.: 
  Fly   190 FGELCDNFVVGYLGPWYALGLGITAI---------PLWHTFITCLMKYVNLKLQILNKRVEEMDI 245

  Fly   232 ------------KGQTYEAWREEVYQELIECIRDLARVHRLREIIQRVLSVPCMAQFVCSAAVQC 284
                        .......|:.::::|.   :::..|:.:..:.:|.::.||.||.|:..:.:.|
  Fly   246 TRLNSKLVIGRLTASELTFWQMQLFKEF---VKEQLRIRKFVQELQYLICVPVMADFIIFSVLIC 307

  Fly   285 TVAMHFLY------VADDHDHTAMIISIVFFSAVTLEVF-------VICYFGDRMRTQSEALCDA 336
                 ||:      |....|:..|.| .:|..|..|.::       |.|:         :.|..|
  Fly   308 -----FLFFALTVGVPSKMDYFFMFI-YLFVMAGILWIYHWHATLIVECH---------DELSLA 357

  Fly   337 FYDCNWIEQLPKFKRELLFTLARTQRPSLIYAGNYIALSLETFEQVMRFTYSVFTLL 393
            ::.|.|.......::.|:|.:...|||..:.| ..:.|:|.||..:.|..||.|.||
  Fly   358 YFSCGWYNFEMPLQKMLVFMMMHAQRPMKMRA-LLVDLNLRTFIDIGRGAYSYFNLL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 72/378 (19%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 60/315 (19%)

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