DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or2a and Or42b

DIOPT Version :10

Sequence 1:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:380 Identity:93/380 - (24%)
Similarity:169/380 - (44%) Gaps:20/380 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YHWRVWELTGLMRP-PGVSSLLYVVYSITVNLVVTVLFPLSLLARLLFTTNMAGLCENLT---IT 77
            |.:|..:..|.:.| .||...:|:.:::...:..|...||..|...:.........|.||   :.
  Fly    23 YLYRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVC 87

  Fly    78 ITDIVANLKFANVYMVRKQLHEIRSLLRLMDARARLVGDPEEISALRKEVNIAQGTFRTFASIFV 142
            |....:::|.|..|.:..:|.:.:::|..:|.|...:.:.|:|..:....|.|...| ||.....
  Fly    88 INAYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAMEEREKIHLVVARSNHAFLIF-TFVYCGY 151

  Fly   143 FGTTLSCVRVVVRPDRELLYPAWFGVDWMHSTRNYVLINIYQLFGLIVQAIQNCASDSYPPAFLC 207
            .|:|.....:..||..:|..|.   :||...|....:.:..:...:....:|:..|||||..:..
  Fly   152 AGSTYLSSVLSGRPPWQLYNPF---IDWHDGTLKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTL 213

  Fly   208 LLTGHMRALELRVRRIGCRTEKSNKGQTYEAWREEVYQELIECIRDLARVHRLREIIQRVLSVPC 272
            :|..|:..|..|:||:  |::::    ..||   |.|:||::|:.|...:.|...||:.|:....
  Fly   214 ILRAHLDMLRERIRRL--RSDEN----LSEA---ESYEELVKCVMDHKLILRYCAIIKPVIQGTI 269

  Fly   273 MAQFVCSAAVQCTVAMHFLYVADDHDHTAMIISIVFFSAVTLEVFVICYFGDRMRTQSEALCDAF 337
            ..||:....|.....::..:.:   |....|.|.:|...:.|:.|..||..:.:....|:|..|.
  Fly   270 FTQFLLIGLVLGFTLINVFFFS---DIWTGIASFMFVITILLQTFPFCYTCNLIMEDCESLTHAI 331

  Fly   338 YDCNWIEQLPKFKRELLFTLARTQRPSLIYAGNYIALSLETFEQVMRFTYSVFTL 392
            :..||::...::|..||:.|...|:|.:..||....:|:.:...|.:|.:||.|:
  Fly   332 FQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITI 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 79/323 (24%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 79/320 (25%)

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