DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or2a and Or23a

DIOPT Version :10

Sequence 1:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster


Alignment Length:408 Identity:108/408 - (26%)
Similarity:194/408 - (47%) Gaps:52/408 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKQEDFKLNTHSAVYYHWRV----WELTGLMRPPGVSSLLYVVYSITVNLVVTVLFPLSLLARL 61
            |:..|..|::       ::||    |.:.|.:   .:|...|  :|.::.|.:.|..|..:|.|.
  Fly     1 MKLSETLKID-------YFRVQLNAWRICGAL---DLSEGRY--WSWSMLLCILVYLPTPMLLRG 53

  Fly    62 LFTTNMAGLCEN---LTITITDIVANLKFANVYMVRKQLHEIRSLLRLMDARARLVGDPEEISAL 123
            ::  :.....||   |::|:|.:...:||........::.|::||:..:|  ||:.|:    |..
  Fly    54 VY--SFEDPVENNFSLSLTVTSLSNLMKFCMYVAQLTKMVEVQSLIGQLD--ARVSGE----SQS 110

  Fly   124 RKEVNIAQGTFR-------TFASIFVFGTTLSCVRVVVRPDRELLYPAWFGVDWMHSTRNYVLIN 181
            .:..|:.:...|       |:|.:|:    ::.|..|...:..|..|.||..||.:|...|:...
  Fly   111 ERHRNMTEHLLRMSKLFQITYAVVFI----IAAVPFVFETELSLPMPMWFPFDWKNSMVAYIGAL 171

  Fly   182 IYQLFGLIVQAIQNCASDSYPPAFLCLLTGHMRALELRVRRIGCRTEKSNKGQTYEAWREEVYQE 246
            ::|..|.:.|.:|..|:||:||..|.|::...:.|.||:..|         |..|:. .||..|:
  Fly   172 VFQEIGYVFQIMQCFAADSFPPLVLYLISEQCQLLILRISEI---------GYGYKT-LEENEQD 226

  Fly   247 LIECIRDLARVHRLREIIQRVLSVPCMAQF-VCSAAVQCTVAMHFLYVADDHDHTAMIISIVFFS 310
            |:.||||...::||.::.:.::|.|.|.|| |....:..|:.:...||...:|.   |..:.|..
  Fly   227 LVNCIRDQNALYRLLDVTKSLVSYPMMVQFMVIGINIAITLFVLIFYVETLYDR---IYYLCFLL 288

  Fly   311 AVTLEVFVICYFGDRMRTQSEALCDAFYDCNWIEQLPKFKRELLFTLARTQRPSLIYAGNYIALS 375
            .:|::.:.:||:|..::.....|..|.:..||::|...::..:|....||:|..|:.|||.:.:.
  Fly   289 GITVQTYPLCYYGTMVQESFAELHYAVFCSNWVDQSASYRGHMLILAERTKRMQLLLAGNLVPIH 353

  Fly   376 LETFEQVMRFTYSVFTLL 393
            |.|:....:..||.|||:
  Fly   354 LSTYVACWKGAYSFFTLM 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 88/331 (27%)
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 88/328 (27%)

Return to query results.
Submit another query.