DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or2a and Or13a

DIOPT Version :10

Sequence 1:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:422 Identity:89/422 - (21%)
Similarity:158/422 - (37%) Gaps:90/422 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WELTGLMRPPGVSSLL---------YVVYSITVNLVVTVLFPLSLLARLLFTTNMAGLCENLTIT 77
            |.||...||....|||         ||:.|:.:.:.....|.|:.|:.::.||      ||...|
  Fly    25 WPLTESSRPWRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITT------ENCCTT 83

  Fly    78 ITDIVANLKFANVYMVRKQLHEIRSLLRLMDARARLVGDPEEISALRKEVNIAQGTFRTFASIFV 142
            ...:   |.|..:..:|....:.|.|:........:....:.        |:|....|...:..:
  Fly    84 FMGV---LNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKN--------NVAAECRRRMVTFSI 137

  Fly   143 FGTTLSCVRVV--VRPDRELLY-PAW------------FGVDWMHSTRNYVLINIYQLFGLIVQA 192
            ..:.|:|:.::  |.|..|:.: ||:            |..|...|...||:..|:..:..|...
  Fly   138 MTSLLACLIIMYCVLPLVEIFFGPAFDAQNKPFPYKMIFPYDAQSSWIRYVMTYIFTSYAGICVV 202

  Fly   193 IQNCASDSYPPAFLCLLTGHMRALELRVRRI--GCRTEKSNKGQTYEAWREEVYQELIECIRDLA 255
            ....|.|:....|:....|....|..|:..:  |...|.:...|             :|.::.:.
  Fly   203 TTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQ-------------LERLKRIV 254

  Fly   256 RVH--------RLREIIQRVLSVPCMAQFVCSAAVQCTVAMHF-----LYVADDHDHTAMIISIV 307
            ..|        ||.:....:|    :|..:.|:.:.|.|....     :::.|      .:..|:
  Fly   255 EKHNNIISFAKRLEDFFNPIL----LANLMISSVLICMVGFQIVTGKNMFIGD------YVKFII 309

  Fly   308 FFSAVTLEVFVICYFGDRMRTQSEALCDAFYDCNW-------IEQL-PKFKR---ELLFTLARTQ 361
            :.|:...:::|:|..||.:..||.......|:|.|       |:.. |..||   ::.|.:..:|
  Fly   310 YISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQ 374

  Fly   362 RPSLIYAGNYIALSLETFEQVMRFTYSVFTLL 393
            :|..|.|..:..|||::|..::..:.|.||||
  Fly   375 QPVRITAFKFSTLSLQSFTAILSTSISYFTLL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 68/361 (19%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 68/354 (19%)

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