DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or2a and LOC1280062

DIOPT Version :10

Sequence 1:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster
Sequence 2:XP_319861.3 Gene:LOC1280062 / 1280062 VectorBaseID:AGAMI1_006402 Length:179 Species:Anopheles gambiae


Alignment Length:187 Identity:35/187 - (18%)
Similarity:85/187 - (45%) Gaps:21/187 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 CLLTGHMRALELRVRRIGCRTEKSNKGQTYEAWREEVYQELIECIRDLARVHRLREIIQRVLSVP 271
            |||   .:...:::|.:     |.|..|...:...:.:::.:.|          .:.:|..|::.
Mosquito    10 CLL---FQTTAMQIREL-----KDNISQAQLSVVIKSHRDTLLC----------AQYLQEALNLS 56

  Fly   272 CMAQFVCSAAVQCTVAMHFLYVADDHDHTAMIISIVFFSAVTLEVFVICYFGDRMRTQSEALCDA 336
            .:.|....:.:.|.:..:.|.:..|   :.::..::....||:|.:..|..|.::..:.|.:..|
Mosquito    57 LLFQLTFCSLIWCLMMFYILLMGFD---SRILNVLILLLIVTVETYTYCTLGTQLTDKGEEILMA 118

  Fly   337 FYDCNWIEQLPKFKRELLFTLARTQRPSLIYAGNYIALSLETFEQVMRFTYSVFTLL 393
            .....|.:|....:::|||.:.|:|:|.::.||.....::..|.::::.:||.:.:|
Mosquito   119 LQQLAWYDQSIPIQKQLLFMIRRSQKPIILSAGKIFYANVLQFSEMVQKSYSFYLVL 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 32/179 (18%)
LOC1280062XP_319861.3 None

Return to query results.
Submit another query.