DRSC/TRiP Functional Genomics Resources

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Protein Alignment kz and PRP22

DIOPT Version :9

Sequence 1:NP_001284815.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_010929.3 Gene:PRP22 / 856732 SGDID:S000000815 Length:1145 Species:Saccharomyces cerevisiae


Alignment Length:968 Identity:257/968 - (26%)
Similarity:429/968 - (44%) Gaps:224/968 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VDKKKKKEGRAQLLGDLAAVQIPEEELQQYTSISQVQTVGLKRLPTLDEYLAKKKERQAQVLAEK 145
            ||.|.:::.|.:.  |...|::..::..::....||:  |.|:      |...|..:..:....:
Yeast   344 VDSKLEEQQRDET--DEIDVELNTDDGPKFLKDQQVK--GAKK------YEMPKITKVPRGFMNR 398

  Fly   146 SSASGLRVNAIKGSKRKLLVEEEEELQAKRKNPNVISVEEDDEDSSSSDEDDEEAPAQSAPIAIP 210
            |:.:|  .|||:..:       ||:|:.||:....|..::..:|.:.:.:|..            
Yeast   399 SAING--SNAIRDHR-------EEKLRKKREIEQQIRKQQSFDDPTKNKKDSR------------ 442

  Fly   211 TPVSIAPPQIAVKPPIKKLKPEPNPPACIHQTVYVPVHRTTEVQNARLRLPILAEEQQVMETINE 275
            ..:.:...|:.|      .:.|.|.   :::::......:..:...|..||:.|...::::.:.:
Yeast   443 NEIQMLKNQLIV------TEWEKNR---MNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRD 498

  Fly   276 NPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTEPRRVAAIAMSKRVAHEMNLPES-EVSYL 339
            |..:::.||||||||||:.|:|.|.|::.:.|||.|:||||||::::||||.|:..... :|.|.
Yeast   499 NQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYT 563

  Fly   340 IRFEGNVTPATRIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHK 404
            ||||....|.||||:||||:|.:|...|..:||||||:|||||||:|.||:|..||.:....|.:
Yeast   564 IRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPE 628

  Fly   405 RGQPLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKI 469
                ||:|:.||||..:.|:|    :.:..|::.:..:.|||.:.:.:....||:..|....:.|
Yeast   629 ----LKVIVTSATLNSAKFSE----YFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDI 685

  Fly   470 HNKLPEGGILIFVTGQQEVNQLVRKLRRTFPYHHAPTKDVAKNGKVSEEEKEETIDDAASTVEDP 534
            |.....|.||:|:|||:|::...                                          
Yeast   686 HINEGPGDILVFLTGQEEIDSCC------------------------------------------ 708

  Fly   535 KELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEADMHEQPDEDDEQEGLEEDNDD 599
             |:.:|..:.:                                                    .|
Yeast   709 -EILYDRVKTL----------------------------------------------------GD 720

  Fly   600 ELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYV 664
            .:|             .|.:||:||.|.||.|::||.|.|.|.|..|.:||:||||:||..|.||
Yeast   721 SIG-------------ELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYV 772

  Fly   665 VDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYS-SAVYNDCFEDFSQP 728
            ||.|..|..:|:...|:...:|:..|:|.|:||.|||||...|.|||||: ||.||:..|: :.|
Yeast   773 VDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLEN-TVP 836

  Fly   729 DIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGAL-EVAKTENTDLPPAVT 792
            :||::.:...:|.::.|||:.::.|.|..||.         :.::|.|| |:...::.|....:|
Yeast   837 EIQRQNLSHTILMLKAMGINDLLKFDFMDPPP---------KNLMLNALTELYHLQSLDDEGKLT 892

  Fly   793 RLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLI---ETGVQRDEDVAPGANRF 854
            .||..:|.||:.|...:.|..|.........|.:::.||||.|..   :..::.|...|    :|
Yeast   893 NLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKA----KF 953

  Fly   855 HRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQLT-- 917
            |..            .||.:.||......:.|...   .::|..|.|..:.:...|.::.|::  
Yeast   954 HHP------------YGDHLTLLNVYTRWQQANYS---EQYCKTNFLHFRHLKRARDVKSQISMI 1003

  Fly   918 -NEINLNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRLKYAYN 981
             .:|.|.:  :....||:|          :|:..::|.....|             :|..:..|.
Yeast  1004 FKKIGLKL--ISCHSDPDL----------IRKTFVSGFFMNAA-------------KRDSQVGYK 1043

  Fly   982 CADMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
            ..:......:|.||.|..|..|:|:|.....     :::.::..:|:|||:|||...|
Yeast  1044 TINGGTEVGIHPSSSLYGKEYEYVMYHSIVL-----TSREYMSQVTSIEPQWLLEVAP 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_001284815.1 HrpA 237..1058 CDD:224557 228/812 (28%)
DEXDc 279..418 CDD:238005 72/139 (52%)
P-loop_NTPase 369..>500 CDD:304359 46/130 (35%)
HELICc 619..704 CDD:197757 42/84 (50%)
HA2 774..859 CDD:214852 24/88 (27%)
OB_NTP_bind 915..1039 CDD:285018 26/126 (21%)
PRP22NP_010929.3 Pnp 1..423 CDD:224106 22/97 (23%)
HrpA 456..1145 CDD:224557 230/819 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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