DRSC/TRiP Functional Genomics Resources

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Protein Alignment kz and PRP2

DIOPT Version :10

Sequence 1:NP_476591.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_014408.1 Gene:PRP2 / 855745 SGDID:S000005294 Length:876 Species:Saccharomyces cerevisiae


Alignment Length:1086 Identity:299/1086 - (27%)
Similarity:470/1086 - (43%) Gaps:309/1086 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NSA--VKKIQIDVDAVAGGNQVGYDEANALVLPSEKRATKIKVDKVQHVKILSKKQRKHLQAIVD 82
            |||  :|:.:.|.:.|......|.::.|   |..|:..::.|..|... ||.|..:      :..
Yeast    46 NSALQLKRSRYDPNKVFSNTNQGPEKNN---LKGEQLGSQKKSSKYDE-KITSNNE------LTT 100

  Fly    83 KKKKKEGRAQLLGDLAAVQIPEEELQQYTSISQVQ---TVGLKRLPTLDEYLAKKKERQAQVLAE 144
            ||       .||||      .|.|.:..:|.|:..   |..:|....:|:...::...:.|    
Yeast   101 KK-------GLLGD------SENETKYASSNSKFNVEVTHKIKNAKEIDKINRQRMWEEQQ---- 148

  Fly   145 KSSASGLRVNAIKGSKRKLLVEEEEELQAKRKNPNVISVEEDDE-----DSSS----SDEDDEEA 200
                  || ||:.|               :..:|:.|::|..|:     |:.:    ::|:|:..
Yeast   149 ------LR-NAMAG---------------QSDHPDDITLEGSDKYDYVFDTDAMIDYTNEEDDLL 191

  Fly   201 PAQSAPIAIPTPVSIAPPQIAVKPPIKKLKPEPNPPACIHQTVYVPVHRTTEVQNARLRLPILAE 265
            |.:                        ||:.|    |.:.|.:.....|...:|.||..||:...
Yeast   192 PEE------------------------KLQYE----ARLAQALETEEKRILTIQEARKLLPVHQY 228

  Fly   266 EQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYA-QHKM-IGVTEPRRVAAIAMSKRVAHE 328
            :.::::.|.:|.::|:.|||||||||||||:|.|.|:. |.|: |.:|:||||||.:::.|||.|
Yeast   229 KDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADE 293

  Fly   329 MNLP-ESEVSYLIRFEGNVTP-ATRIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDIL 391
            ||:. ..||.|.||||...|| .|.:|:||||:||:|..||..|||||.|::||||||::.||||
Yeast   294 MNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDIL 358

  Fly   392 VGLLSRIVPLRHKRGQPLKLIIMSATL---RVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKR 453
            :|||..|:|.|    ..|||:|.|||:   :.|:|.:|..:|.:|       .|::||.||:..:
Yeast   359 IGLLKDILPQR----PTLKLLISSATMNAKKFSEFFDNCPIFNVP-------GRRYPVDIHYTLQ 412

  Fly   454 TPDDYVAEAYRKTLKIH--NKLPEGGILIFVTGQQEVNQLVRKLRRTFPYHHAPTKDVAKNGKVS 516
            ...:|:..|.....:||  ..|| |.||:|:|||:|:.:...||                     
Yeast   413 PEANYIHAAITTIFQIHTTQSLP-GDILVFLTGQEEIERTKTKL--------------------- 455

  Fly   517 EEEKEETIDDAASTVEDPKELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEADMH 581
                ||.:                                                         
Yeast   456 ----EEIM--------------------------------------------------------- 459

  Fly   582 EQPDEDDEQEGLEEDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCV 646
                                     |.:||..:|.: :.|:|:.|..|:|.:||.|.|:.||..|
Yeast   460 -------------------------SKLGSRTKQMI-ITPIYANLPQEQQLKIFQPTPENCRKVV 498

  Fly   647 VSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYR 711
            ::||:|||||||..|:||:|.|..|...|...||::..:....|:||.|||||||||:..|.|:|
Yeast   499 LATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFR 563

  Fly   712 LYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGA 776
            :::...|....|...:|:|.:..:.:.:|.:..:|:..::.||....|....|:.:...|.:|||
Yeast   564 IFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGA 628

  Fly   777 LEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKML--ALSHQQNLLPYTVC---LVAALSVQEVL 836
            |....|        :||||.::..||..|.|.|:|  |.:|:|       |   |...|::..:|
Yeast   629 LNSKGT--------ITRLGKMMCEFPCEPEFAKVLYTAATHEQ-------CQGVLEECLTIVSML 678

  Fly   837 IET-----GVQRDEDVAPGANRFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEF- 895
            .||     |.:||.                |||...::..|.::.|...       :|.|..:| 
Yeast   679 HETPSLFIGQKRDA----------------AASVLSEVESDHILYLEIF-------NQWRNSKFS 720

  Fly   896 ---CAANGLRQKAMSEVRKLRVQL---TNEINLNVSDVELGVDPELKPPTDA---QARFLRQILL 951
               |..:.::.|.|..||.:|.||   :.::.|    ||......:|....|   .||..| ..:
Yeast   721 RSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGL----VEKNDQARMKIGNIAGYINARITR-CFI 780

  Fly   952 AGMGDRVARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVL-------RQKAPEWVIYQE 1009
            :|....:.:..|    ...:...|.....|.:       :|.:|:|       .|:..::|:||:
Yeast   781 SGFPMNIVQLGP----TGYQTMGRSSGGLNVS-------VHPTSILFVNHKEKAQRPSKYVLYQQ 834

  Fly  1010 AYELQNGDSTKMFIRGITAI-EPEWLLLYVPLLCNIREVREDPAPR 1054
            ...     ::|.|||....| :.|||:..||.:  .:::.:|...|
Yeast   835 LML-----TSKEFIRDCLVIPKEEWLIDMVPQI--FKDLIDDKTNR 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_476591.1 HrpA 260..>1071 CDD:441249 248/832 (30%)
DEXHc_DHX37 260..439 CDD:350740 91/185 (49%)
PRP2NP_014408.1 PTZ00121 <7..174 CDD:173412 38/176 (22%)
HrpA 223..>738 CDD:441249 212/672 (32%)
OB_NTP_bind 775..862 CDD:400182 22/103 (21%)

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