DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kz and PRP43

DIOPT Version :9

Sequence 1:NP_001284815.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_011395.1 Gene:PRP43 / 852757 SGDID:S000003088 Length:767 Species:Saccharomyces cerevisiae


Alignment Length:880 Identity:265/880 - (30%)
Similarity:384/880 - (43%) Gaps:218/880 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 PTPVSIAPPQIA--VKPPIKKLKPEPNPPACIHQTV----------------------------- 243
            |.||..:.|:.|  :...:.|..|.|:....:|...                             
Yeast    12 PDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTG 76

  Fly   244 --YVPVHRTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLY--EAGYAQ 304
              :.|  :..::...|..||:.|:..:.::....|.|::..||||||||||:|||:.  |..:.:
Yeast    77 REFTP--KYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLE 139

  Fly   305 HKMIGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDF 368
            :..:..|:||||||:::::|||.||::. ..||.|.||||...:..|.:|:||||:||:|...|.
Yeast   140 NTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 204

  Fly   369 LLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKIP 433
            .||:||.|||||||||::.||||:|||.::|    ||...||:|||||||....|   .|.|. .
Yeast   205 DLSRYSCIILDEAHERTLATDILMGLLKQVV----KRRPDLKIIIMSATLDAEKF---QRYFN-D 261

  Fly   434 PPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVNQLVRKLRRT 498
            .|||.|..|.:||.:::......||:..|.|..|:||.....|.||:|:||:.|:...|||:   
Yeast   262 APLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKI--- 323

  Fly   499 FPYHHAPTKDVAKNGKVSEEEKEETIDDAASTVEDPKELEFDMKRVIRNIRKSKKKFLAQMALPK 563
                                                                             
Yeast   324 ----------------------------------------------------------------- 323

  Fly   564 INLDDYKLPGDDTEADMHEQPDEDDEQEGLEEDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSS 628
                  .|.||.                           |..|.|.|     ||.|.|||..|..
Yeast   324 ------SLEGDQ---------------------------LVREEGCG-----PLSVYPLYGSLPP 350

  Fly   629 EKQNRIFLPVPDG-----CRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTY 688
            .:|.|||.|.|:.     .|..|:|||:|||||||..|.||||.|..|.::|:....|.:.:|:.
Yeast   351 HQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSP 415

  Fly   689 TSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHF 753
            .|||||.||||||||...|.|:|||:...:.....:.|.|:|.:..:...:|:::.:|||.:|||
Yeast   416 ISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480

  Fly   754 PFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQN 818
            .|..||....:..|...|..|..|:    :..:|.|    ||.:.|:||:.|....||..|.:..
Yeast   481 DFMDPPAPETMMRALEELNYLACLD----DEGNLTP----LGRLASQFPLDPMLAVMLIGSFEFQ 537

  Fly   819 LLPYTVCLVAALSVQEVLIETGVQRDEDVAPGANRFHRKRQSWAASGNYQLLGDPMVLLRAVGA- 882
            .....:.:||.|||..|.|..  .:|:..|..|........           ||.:.||....| 
Yeast   538 CSQEILTIVAMLSVPNVFIRP--TKDKKRADDAKNIFAHPD-----------GDHITLLNVYHAF 589

  Fly   883 -AEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQLTNEIN-----LNVSDVELGVDPELKPPTDA 941
             ::.|...| :.::|..:.|..:::|....:|.||...:|     ||.:|.|   .|:.      
Yeast   590 KSDEAYEYG-IHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYE---SPKY------ 644

  Fly   942 QARF--LRQILLAGMGDRVARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVLRQKAPEW 1004
               |  :|:.|.:|...:||:|            |.....|......:...:|.|:||...| ||
Yeast   645 ---FDNIRKALASGFFMQVAKK------------RSGAKGYITVKDNQDVLIHPSTVLGHDA-EW 693

  Fly  1005 VIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
            |||.| :.|    ::|.:||.:|::.||||:...|
Yeast   694 VIYNE-FVL----TSKNYIRTVTSVRPEWLIEIAP 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_001284815.1 HrpA 237..1058 CDD:224557 257/851 (30%)
DEXDc 279..418 CDD:238005 73/141 (52%)
P-loop_NTPase 369..>500 CDD:304359 59/130 (45%)
HELICc 619..704 CDD:197757 45/89 (51%)
HA2 774..859 CDD:214852 23/84 (27%)
OB_NTP_bind 915..1039 CDD:285018 37/130 (28%)
PRP43NP_011395.1 HrpA 55..753 CDD:224557 256/837 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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