DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kz and dhx38

DIOPT Version :9

Sequence 1:NP_001284815.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_002937626.2 Gene:dhx38 / 734019 XenbaseID:XB-GENE-990308 Length:1212 Species:Xenopus tropicalis


Alignment Length:1082 Identity:292/1082 - (26%)
Similarity:472/1082 - (43%) Gaps:263/1082 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GYDEA-NALVLPSEKRATKIKVDKVQHVKILSKK---QRKHLQAIVDKKKKKEGRAQLLGDLAAV 100
            |:||: |||...||   ..:|..:.|..|..||:   ||:.:..  |.::.:..|....|.:..:
 Frog   316 GFDESHNALTSTSE---DYVKKREQQLQKQTSKRVSAQRRQINE--DNERWETNRMLTSGVVQRL 375

  Fly   101 QIPEEELQQYTSISQVQTVGLKRLPTLDEYLAKKKERQAQVLAEKSSASGLRVNAIKGSKRKLLV 165
            :: :|:.::..:......|.....|.||..:...|:.: .|:..:.:.|.|.:.|.|||:   ||
 Frog   376 EV-DEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPE-PVIPVRDATSDLAIIARKGSQ---LV 435

  Fly   166 ----EEEEELQAKRKNPNVISVEEDDEDSSSSDEDDEEAP-AQSAPIAIPTPVSIAPPQIAVKPP 225
                |::|..:|:.|:..:...:..|........|:.:.| |:...:........|...      
 Frog   436 RKHREQKERKKAQHKHWELAGTKLGDIMGVKKQVDEPDKPIAEDGAVDYKAEQKFADHM------ 494

  Fly   226 IKKLKPEPNPPACIHQTVYVPVHRTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKT 290
              :.:.|.:.          ...|...:...|..|||.|.:|:::..|.:|.||||.||||||||
 Frog   495 --RERSEASS----------DFSRKKSLMEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKT 547

  Fly   291 TQLPQFLYEAGYAQHKMIGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKF 354
            |||.|:|:|.||..:.||..|:||||||::::|||:.||.:. ..||.|.||||...:..|.||:
 Frog   548 TQLTQYLHEDGYTDYGMIACTQPRRVAAMSVAKRVSEEMQVSLGEEVGYAIRFEDCTSEKTLIKY 612

  Fly   355 MTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATL- 418
            ||||:||:|...:..|..||.:|:|||||||:.||:|.|||..:|    .|...||||:.|||: 
 Frog   613 MTDGILLRECLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVV----TRRSDLKLIVTSATMD 673

  Fly   419 --RVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIF 481
              :.:.|..|..:|.||       .|.|||.|.|.|...:|||..|.::.|:||.....|.||||
 Frog   674 ADKFATFFGNVPIFYIP-------GRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGAAGDILIF 731

  Fly   482 VTGQQEV----NQLVRKLRRTFPYHHAPTKDVAKNGKVSEEEKEETIDDAASTVEDPKELEFDMK 542
            :.||:::    :|:|.:|                          |.:|.|               
 Frog   732 MPGQEDIEVTSDQIVERL--------------------------EELDSA--------------- 755

  Fly   543 RVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEADMHEQPDEDDEQEGLEEDNDDELGLEDES 607
                                                                             
 Frog   756 ----------------------------------------------------------------- 755

  Fly   608 GMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKT 672
                   .||.|||:||.|.|:.|.:||...|||.|.|:|:||:||||||:..|.:|:|.|..|.
 Frog   756 -------PPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 813

  Fly   673 RLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVED 737
            ::::...|:.|..:...|:|:|:||:|||||...|.|||||:.:.|.:.....:.|:||:..:.:
 Frog   814 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCYRLYTQSAYKNELLHTTVPEIQRTNLSN 878

  Fly   738 LMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFP 802
            ::|.::.:|:..::.|.|..||.:..:..:..:|.:||||     :||.   |:|..|.::..||
 Frog   879 VVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGAL-----DNTG---ALTPTGRLMVEFP 935

  Fly   803 VAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLI-------ETGVQRDEDVAPGANR--FHRKR 858
            :.|...|||.:|.........:.:|:.|||..:..       |:...|::...|.::.  :....
 Frog   936 LDPALSKMLIVSCDMGCSSEILIVVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVF 1000

  Fly   859 QSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQLTN-EINL 922
            ..| .:.||                    |.|    :|..:.:..|||.:||::|.||.: .::.
 Frog  1001 LQW-KNNNY--------------------SSG----WCNQHFIHAKAMRKVREVRAQLKDIMVSQ 1040

  Fly   923 NVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRLKYAYNCADMEE 987
            .:|....|.|.::.......|.|.:...|.|:|:.|..:..:                       
 Frog  1041 RMSLSSCGSDWDIVRKCICAAYFHQAARLKGIGEYVNVRTGM----------------------- 1082

  Fly   988 PAFLHVSSVL--RQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVPLLCNIR---EV 1047
            |..||.:|.|  ....|::::|.|...     :||.:::.:||::.|||....|:..:|:   :.
 Frog  1083 PCHLHPTSSLFGMGYTPDYIVYHELVM-----TTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKT 1142

  Fly  1048 REDPAPRFDKTSGKIFCHVDATFGKSGWELPLGEVEMPLSEK 1089
            |::...|..:                  |:...|.||.|:|:
 Frog  1143 RQENRRRAKE------------------EVSAMEEEMMLAEE 1166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_001284815.1 HrpA 237..1058 CDD:224557 243/843 (29%)
DEXDc 279..418 CDD:238005 75/139 (54%)
P-loop_NTPase 369..>500 CDD:304359 55/137 (40%)
HELICc 619..704 CDD:197757 40/84 (48%)
HA2 774..859 CDD:214852 23/93 (25%)
OB_NTP_bind 915..1039 CDD:285018 26/126 (21%)
dhx38XP_002937626.2 HrpA 483..1131 CDD:224557 241/850 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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