DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kz and Dhx30

DIOPT Version :9

Sequence 1:NP_001284815.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_006243888.1 Gene:Dhx30 / 367172 RGDID:1308888 Length:1222 Species:Rattus norvegicus


Alignment Length:1138 Identity:259/1138 - (22%)
Similarity:443/1138 - (38%) Gaps:325/1138 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AVAGG--NQVGYDEANALVLPSEKRATKIKVDKVQHVKILSKKQRKHLQAIVDKKKKKEGRAQLL 94
            |..||  ..:|.:|       .|....:::...:...:.||..|:.....:.|   .:.|..::.
  Rat   204 AGTGGLSRSLGREE-------EEDEEEELEEGTIDVTEFLSMTQQDSHNPLRD---SRGGSFEMT 258

  Fly    95 GDLAAVQ------IPEEELQQYTSIS----------QVQTVGLK-RLPTLD-------EYLAKKK 135
            .|.:|::      :|:..|.:...|:          |..|||.| :|.||.       .::||.:
  Rat   259 DDDSAIRALTQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLATLTLLWPCPMTFVAKGR 323

  Fly   136 ERQAQVLAEKSSASGLRVNAIKGSKRKLLVEEEEELQAKRKNP------NVISVEEDDEDSSSSD 194
             |:|:  ||..:|:    .|.|..|...||:...|       |      |:.|:.|..|      
  Rat   324 -RKAE--AENKAAA----LACKKLKSLGLVDRNNE-------PLTHAMYNLASLRELGE------ 368

  Fly   195 EDDEEAPAQSAP--IAIPTPV---------------SIAPPQIAVK-----PPIKKLKPEPNPPA 237
                   .|..|  |.:|.|:               |...|::.::     |..|...|..:|  
  Rat   369 -------TQRRPCTIQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDP-- 424

  Fly   238 CIHQTVYVPVHRTTEVQNA-------RLRLPILAEEQQ---------VMETINENPIVIVAGETG 286
             |....|:|:....||:.:       |.|.||..|..|         ::..|.::|:|:::|:||
  Rat   425 -ITGKPYMPLSEAEEVRLSQSLLELWRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTG 488

  Fly   287 SGKTTQLPQFLYE----AGYAQHKMIGVTEPRRVAAIAMSKRVAHEMNLP--ESEVSYLIRFEGN 345
            .||||::||.|.|    .|......:.:|:|||::|:::::||:||:. |  ...|.:.:|.|..
  Rat   489 CGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELG-PSLRRNVGFQVRLESK 552

  Fly   346 VTPATR---IKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQ 407
              |..|   :.|.|.|:||::::::..|...|.:|:||.|||.|.||.|:.||..:     :|..
  Rat   553 --PPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL-----QRLN 610

  Fly   408 P-LKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHN 471
            | |:|::||||   .|....:|.|. ..|::||....:||..|:                     
  Rat   611 PALRLVLMSAT---GDNERFSRYFG-GCPVIKVPGFMYPVKEHY--------------------- 650

  Fly   472 KLPEGGILIFVTGQQEVNQLVRKL-RRTFPYHHAPTKDVAKNGKVSEEEKEETIDDAASTVEDPK 535
                            :..::.|| :..:|:.|               ...|:.|:.|       
  Rat   651 ----------------LEDILAKLGKHQYPHRH---------------RHHESEDECA------- 677

  Fly   536 ELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYK--------LPGDDTEADMHEQPDEDDEQEG 592
             |:.|:              :..:.|   ::|...        |||             ..|.:|
  Rat   678 -LDLDL--------------VTDLVL---HIDARGEPGGILCFLPG-------------WQEIKG 711

  Fly   593 LEEDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLT 657
            :::...:.||:.:...:         :||::|.:....|..||...|.|.|..|::||:||||:|
  Rat   712 VQQRLQEALGMHESKYL---------ILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSIT 767

  Fly   658 IPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCF 722
            :..|.:|||.|..|...||..|.||.....:.|:|:..||.|||||..:|..|.|:..:.. :..
  Rat   768 VNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRL-EKM 831

  Fly   723 EDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFP-------FPSPPDQVQLQAAERRLIVLGALEVA 780
            ..|..|:|.:.|:|:|:||.:       :|.|       .....|...::|.:..:|:|..:.| 
  Rat   832 VPFQVPEILRTPLENLVLQAK-------IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGV- 888

  Fly   781 KTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDE 845
                .|....:|.||..::.....||..|.:.|:.....|...:.:|:.|:           ||.
  Rat   889 ----LDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-----------RDP 938

  Fly   846 DVAPGANRFHRKRQSWAASGNYQLL------GDPMVLLRAV-GAAEYAGSQGRL--PEFCAANGL 901
                    |....|:.|.....:.|      .|.:..:||| |..|....|.|.  ..:...|.|
  Rat   939 --------FSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLL 995

  Fly   902 RQKAMSEVRKLRVQLTNEINLNVSDVELGVDPELKPPTDA------------QARFLRQILLAGM 954
            ...::..:..|..|.:.    |:.:..|     :..|:|.            :...::.:|:||:
  Rat   996 YAPSLRFIHGLIKQFSE----NIYEAFL-----VGKPSDCTLPSAQCNEYSEEEELVKGVLMAGL 1051

  Fly   955 GDRVARKVPLADIADKEERRRLKYAYNCADMEEPA---FLHVSSVLRQKA---PEWVIYQEAYEL 1013
            ...      |..:...:..|:.|:..|.......:   .||.|::.|:..   ..|:.|..|.: 
  Rat  1052 YPN------LIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVK- 1109

  Fly  1014 QNGDSTKMFIRGITAIEPEWLLLYVPLLCNIRE 1046
            .||   .:|:|..:.:.|..:||......:||:
  Rat  1110 SNG---SVFVRDSSQVHPLAVLLLTDGDVHIRD 1139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_001284815.1 HrpA 237..1058 CDD:224557 206/879 (23%)
DEXDc 279..418 CDD:238005 54/148 (36%)
P-loop_NTPase 369..>500 CDD:304359 33/132 (25%)
HELICc 619..704 CDD:197757 36/84 (43%)
HA2 774..859 CDD:214852 16/84 (19%)
OB_NTP_bind 915..1039 CDD:285018 26/141 (18%)
Dhx30XP_006243888.1 DEXDc 466..645 CDD:214692 63/190 (33%)
DEXDc 480..621 CDD:238005 53/148 (36%)
HELICc 714..813 CDD:197757 37/107 (35%)
HA2 885..968 CDD:214852 19/106 (18%)
OB_NTP_bind 1008..1130 CDD:285018 25/140 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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