DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kz and Dhx35

DIOPT Version :9

Sequence 1:NP_001284815.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:XP_006235485.1 Gene:Dhx35 / 362260 RGDID:1311165 Length:703 Species:Rattus norvegicus


Alignment Length:844 Identity:255/844 - (30%)
Similarity:378/844 - (44%) Gaps:197/844 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PIKKLKP-EPNPPACIHQ------------TVYVPVHRTTEVQNARLRLPILAEEQQVMETINEN 276
            |:|..|| ...|...|.:            .:|.| :....::..|.:||:......::..:...
  Rat     7 PVKFWKPGTEGPGVSISEERQSVTENSGTTVIYNP-YAALSIEQQRQKLPVFKLRNHILYLVENY 70

  Fly   277 PIVIVAGETGSGKTTQLPQFLYEAGY-AQHKMIGVTEPRRVAAIAMSKRVAHEMN-LPESEVSYL 339
            ..|::.||||.||:||:||:|.|||: |:.:::|||:||||||:.::.|||.|.. :...||.|.
  Rat    71 QTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYC 135

  Fly   340 IRFEGNVTP-ATRIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRH 403
            |||:....| ||||||:|||:|::|:..|.||:||||::|||||||::||||.:|||.:|   :.
  Rat   136 IRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKI---QK 197

  Fly   404 KRGQPLKLIIMSATLRVSDFTENTRLFKIPPP------LLKVEARQFPVTIHFQKRTPDDYVAEA 462
            |||. |:||:.||||....|.:.....:...|      :|.||.|.|||.|.:.:....||:...
  Rat   198 KRGD-LRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKAT 261

  Fly   463 YRKTLKIHNKLPEGGILIFVTGQQEVNQLVRKLRRTFPYHHAPTKDVAKNGKVSEEEKEETIDDA 527
            ....:|||....:|.||.|:|||:||..:|..|                            |:.|
  Rat   262 VDTVVKIHQTEGDGDILAFLTGQEEVETVVSML----------------------------IEQA 298

  Fly   528 ASTVEDPKELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEADMHEQPDEDDEQEG 592
                                      :.||:                                  
  Rat   299 --------------------------RALAR---------------------------------- 303

  Fly   593 LEEDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLT 657
                              :|.::.|.|||:|:.|.|.:|.::|..|....|..:|:|||||||:|
  Rat   304 ------------------TGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSIT 350

  Fly   658 IPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCF 722
            |..|.||:|||..|.|.|:..|.:...||...|:|||:|||||.||..:|.|||||:    .:.|
  Rat   351 ISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYT----EEAF 411

  Fly   723 EDFSQ---PDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGAL--EVAKT 782
            |...|   |::|:..:..::||::.:|||.|:.|.|.|||....:..|...|..||.|  :...|
  Rat   412 EQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLT 476

  Fly   783 ENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDV 847
            |         .||..|:.||:.|.|.|||..|.........:.:.|.:.:|.|.:....|:.:  
  Rat   477 E---------PLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQ-- 530

  Fly   848 APGANRFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKL 912
               |.|.|||   :|...     ||.:.:|...   |......:..::|..:.|..|.:.....:
  Rat   531 ---ATRVHRK---FAVEE-----GDHLTMLNVY---EAFIKHNKSSQWCQEHFLNYKGLVRAATV 581

  Fly   913 RVQLTN-EINLNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRL 976
            |.||.. .:...|..:....||:   |       :.:.:::|.....||.....           
  Rat   582 RDQLKKLLVKFQVPKMSSEGDPD---P-------VLRCIVSGFFANAARFHSTG----------- 625

  Fly   977 KYAYNCADMEEPAFLHVSSVL-RQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
              ||.....:....:|.:||| .:|.|.||||.|..:     ::|.::|.:||||..|||...|
  Rat   626 --AYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQ-----TSKYYMRDVTAIESAWLLELAP 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_001284815.1 HrpA 237..1058 CDD:224557 250/831 (30%)
DEXDc 279..418 CDD:238005 77/141 (55%)
P-loop_NTPase 369..>500 CDD:304359 57/136 (42%)
HELICc 619..704 CDD:197757 42/84 (50%)
HA2 774..859 CDD:214852 25/86 (29%)
OB_NTP_bind 915..1039 CDD:285018 31/125 (25%)
Dhx35XP_006235485.1 DEXDc 53..224 CDD:214692 82/174 (47%)
DEXDc 73..211 CDD:238005 77/141 (55%)
HELICc 301..396 CDD:197757 45/146 (31%)
HA2 465..549 CDD:214852 28/105 (27%)
OB_NTP_bind 584..683 CDD:285018 32/127 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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