DRSC/TRiP Functional Genomics Resources

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Protein Alignment kz and smgl-2

DIOPT Version :10

Sequence 1:NP_476591.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_001294374.1 Gene:smgl-2 / 177135 WormBaseID:WBGene00021365 Length:1089 Species:Caenorhabditis elegans


Alignment Length:962 Identity:248/962 - (25%)
Similarity:403/962 - (41%) Gaps:269/962 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 DEYLAKKKERQA---QVLAEKSSASGLRVNAIKGSKRKLLVEEEEELQA-------KRKNPNVIS 182
            :||   :|.|.|   ..|.::...||.| ...|.::::|:..:.:.:|:       :||...   
 Worm     7 EEY---EKHRGALFRHFLPDEPGTSGNR-RGEKSTEQELIDTQRKSIQSYFNRFFRERKGET--- 64

  Fly   183 VEEDDEDSSSSDEDDEEAPAQSAPIAIPTP-------------VSIAPPQIAVKPPIKKLKPEPN 234
              .|..|.:....||         :.||..             :.|.|.|:....|......|..
 Worm    65 --NDHFDVNRVKFDD---------LGIPQDTGGLNRIRFKGENLGIMPTQLGHITPWLYRHFEYA 118

  Fly   235 PPACIHQTVYVPVHRTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYE 299
            ....:....:....:..:::..:..|||.....:::|.:..|.::||||:||.||:||:||:|.:
 Worm   119 YHVALQFNQHQKFQKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLK 183

  Fly   300 AGYAQHKMIGVTEPRRVAAIAMSKRVAHE-MNLPESEVSYLIRFEGNVTPATRIKFMTDGVLLKE 363
            ||:..   :..|:|||:|..|:::|||:| :|...|||::.||||...:..|::.|:|:|:||::
 Worm   184 AGFTG---VACTQPRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQKTKLLFLTEGLLLRQ 245

  Fly   364 IETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTR 428
            :|.|.||.||:||||||.|||.:.:|:|:|||..:...|    ..||||:||||:       |..
 Worm   246 MEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKR----DDLKLILMSATI-------NLD 299

  Fly   429 LFK---IPPPLLKVEARQFPVTIHF----------QKRT----PDDYVAEAYRKTLKIHNK---- 472
            |||   ...|:::|..|.||:.:.:          .|:|    |     |.|.|.|::.:|    
 Worm   300 LFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDP-----EPYLKILELIDKQFPS 359

  Fly   473 LPEGGILIFVTGQQEVNQLVRKLRRTFPYHHAPTKDVAK--NGKVSEEEKEETIDDAASTVEDPK 535
            ...|..|||:.|..|::.:...|           |:.|:  ||                      
 Worm   360 TQRGDALIFLNGVAEISMVAEHL-----------KNYAELTNG---------------------- 391

  Fly   536 ELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEADMHEQPDEDDEQEGLEEDNDDE 600
                                                                             
 Worm   392 ----------------------------------------------------------------- 391

  Fly   601 LGLEDESGMGSGQRQPLW-VLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYV 664
                             | :|.|:|.||.|:|:::|...|.|.|.|::||||||||:||..|::|
 Worm   392 -----------------WIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFV 439

  Fly   665 VDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPD 729
            :|.|:.....::..||.......:.|||||:||.|||||...|.||||||...: :..:||:..:
 Worm   440 IDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQF-EKMDDFTVSE 503

  Fly   730 IQKKPVEDLMLQMRC--MGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVT 792
            |.:..::::.|:|..  :|:|... |||...|.:..|...   |.||....|.:::..|: ..:|
 Worm   504 INRVSLQEMALKMISLNLGLDPRT-FPFIEKPSEDVLNEG---LEVLKFQRVLRSDRGDI-LTLT 563

  Fly   793 RLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPGANRFHR- 856
            .||:::|:.||.....|||......:.|...:.:.|.||||              :|..||.:| 
 Worm   564 ALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQ--------------SPFTNRSYRE 614

  Fly   857 -----KRQSWAASGNYQLLGDPMVLLRAVGAAEYA---GSQGRLPEFCAANGLRQKAMSEVRKLR 913
                 :|.|..:.     ||||..|:...  .|:.   ..:|....:...||:.:..:.|:.|||
 Worm   615 LEIVERRASLTSP-----LGDPFTLISIF--REWVLQKAFEGTARRWTMENGIDEHRLYEISKLR 672

  Fly   914 V---QLTNEINL--NVSDVELGVDPELKPPTD-AQARFLRQILLAGMGDRVARKVPLAD------ 966
            .   |:..:..|  ..|..|.|.|...:...| .:.|.|..:..:...:...:||..|:      
 Worm   673 AQYRQILEDAGLVEKASAAETGEDDSRQRRIDQGEKRKLFDLKKSQRNNDRRQKVLNANKHFDKI 737

  Fly   967 IADKEERRRLKYAYNCADME---EPAFLHVSSVLRQKAPEWVIYQEAYELQN 1015
            :.||||.          |:|   :|....|.:|      |:::..:..:::|
 Worm   738 LEDKEEE----------DLEAEKDPLKADVKTV------EFLLSHKQRDVEN 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_476591.1 HrpA 260..>1071 CDD:441249 223/807 (28%)
DEXHc_DHX37 260..439 CDD:350740 78/182 (43%)
smgl-2NP_001294374.1 HrpA 143..>694 CDD:441249 204/711 (29%)
OB_NTP_bind 788..888 CDD:400182
Blue background indicates that the domain is not in the aligned region.

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