DRSC/TRiP Functional Genomics Resources

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Protein Alignment kz and ddx-35

DIOPT Version :10

Sequence 1:NP_476591.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_497420.1 Gene:ddx-35 / 175308 WormBaseID:WBGene00022056 Length:732 Species:Caenorhabditis elegans


Alignment Length:916 Identity:260/916 - (28%)
Similarity:382/916 - (41%) Gaps:247/916 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 GLRVNAIKGS-KRKLLVEEEEELQAKRKNPNVISVEEDDEDSSSSDEDDEEAPAQSAPIAIPTPV 213
            |.|....||: .|:.....::...|.|..|.:.                ||...::|..|     
 Worm     8 GHRQEPRKGAGARRGFARPDDSADAPRTGPLIF----------------EERSTENAGAA----- 51

  Fly   214 SIAPPQIAVKPPI-KKLKPEPNPPACIHQTVYVPVHRTTEVQNARLRLPILAEEQQVMETINENP 277
                      ||| ::||...||.|.::            :|..|:||||......::.......
 Worm    52 ----------PPIEEQLKVHNNPYASLN------------IQQQRIRLPIFKNRGHILYMCERYR 94

  Fly   278 IVIVAGETGSGKTTQLPQFLYEAGY-AQHKMIGVTEPRRVAAIAMSKRVAHEMN-LPESEVSYLI 340
            .:|:.||||.||:||:||||.|||: |..:.|.:|:|||||.:.::.|||.|.: :...:|.|.:
 Worm    95 TIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTV 159

  Fly   341 RFEGNVTPATRIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKR 405
            ||:......|::||||||:||:||..|.||||||:|::|||||||..||||:|||.:|:.:|:  
 Worm   160 RFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRN-- 222

  Fly   406 GQPLKLIIMSATLRV---SDF---TENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYR 464
              .|::|:.||||..   .||   .|.....|....::.||.|..||.:|..|.:..||...|..
 Worm   223 --DLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVD 285

  Fly   465 KTLKIHNKLPEGGILIFVTGQQEVNQLVRKLRRTFPYHHAPTKDVAKNGKVSEEEKEETIDDAAS 529
            ..:.||.....|.||:|:|||.||..:..|||                                 
 Worm   286 TVINIHKHENPGDILVFLTGQDEVEDVCEKLR--------------------------------- 317

  Fly   530 TVEDPKELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEADMHEQPDEDDEQEGLE 594
                  ||..::|...|                                                
 Worm   318 ------ELAGNLKNCDR------------------------------------------------ 328

  Fly   595 EDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIP 659
                                  |||:|.|..|.:.:|.:.|...|.|.|..||:||:||.|:|||
 Worm   329 ----------------------LWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIP 371

  Fly   660 HIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFED 724
            .|.||:|.|..|.|......||...:....|||||:|||||||||..|.|||||..:.    ||.
 Worm   372 GICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESE----FER 432

  Fly   725 FSQ---PDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTD 786
            |::   |:||:..:...:||::.:|:..|..|.:.|||....:......|..|||::    |.:.
 Worm   433 FAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAID----ETSQ 493

  Fly   787 LPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDE-DVAPG 850
            |   .:.||..::.||:.|...|.|..|.:.......|.:||.:.:|:|.|....||.: ||.  
 Worm   494 L---TSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVI-- 553

  Fly   851 ANRFHRKRQSWAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQ 915
                   |:.:|...     ||.|.:|...  .::. ..||..::|:.:.:..:.:.....:|.|
 Worm   554 -------RKKFAVEE-----GDHMTMLNVF--TKFV-ENGRSKKWCSDHFVNYRGLMRADNVRSQ 603

  Fly   916 LTN-----EIN-------LNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVARKVPLADIA 968
            |..     ||.       :|.|:                  .:||.|:.|...:.|:    ....
 Worm   604 LVRLLKRFEIEKVSSRGLINCSE------------------NIRQCLVTGFFSQAAQ----YHYT 646

  Fly   969 DKEERRRLKYAYNCADMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEW 1033
            .|....:..:.:|       .:...|.:.::..|:|||:.|..:    ||    ||.:|.|||||
 Worm   647 GKYMTVKESFPFN-------MYKGSSIMFKKDYPKWVIFTEVMQ----DS----IRDVTVIEPEW 696

  Fly  1034 LLLYVP 1039
            |....|
 Worm   697 LYELAP 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_476591.1 HrpA 260..>1071 CDD:441249 237/804 (29%)
DEXHc_DHX37 260..439 CDD:350740 80/186 (43%)
ddx-35NP_497420.1 HrpA 95..>703 CDD:441249 234/786 (30%)

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