DRSC/TRiP Functional Genomics Resources

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Protein Alignment kz and rha-1

DIOPT Version :9

Sequence 1:NP_001284815.1 Gene:kz / 31205 FlyBaseID:FBgn0001330 Length:1192 Species:Drosophila melanogaster
Sequence 2:NP_495890.2 Gene:rha-1 / 174417 WormBaseID:WBGene00004355 Length:1301 Species:Caenorhabditis elegans


Alignment Length:1234 Identity:274/1234 - (22%)
Similarity:482/1234 - (39%) Gaps:332/1234 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ILSKKQRKHLQAIVDKKKKKEG-------RAQLLGDLAAVQIPE----EELQQYTSISQVQTVGL 121
            |..|.:.......||.|.:..|       :..|...|..:::|:    .::::..::..::|...
 Worm   144 ITQKAEEIAASETVDLKSEIHGGWTMENSKKALNEFLQKMRLPQVNYGTKIRESNTVKTMETTAQ 208

  Fly   122 KRLPTLDEYLAKKKERQAQVLAEKSSASGL-----RVNAIK---GSKRKLLVEEEEELQAKRKNP 178
            ..:|.:::.|..|.....:.::|.:.|..:     .:|.::   |..:|..|....|:       
 Worm   209 IFVPQINKNLVGKGTGSNKKVSEAACAMNIVRQMFHLNIMQSYSGPIKKSKVSTLPEI------- 266

  Fly   179 NVISVEEDDEDSSSS---------DEDDEEAPAQSAPIAIPTPVSIA---------PPQIAVKPP 225
             .||:.||.....:.         .|.:|.:....||.::.|.|.:|         ...|:..||
 Worm   267 -AISIPEDLSTRVTEYVRSCGLELPEINETSATPEAPTSLLTDVKLAQFPVSEICSASNISWAPP 330

  Fly   226 IKKLKP------EPNPPAC-----IHQTV-----YVPVHRTTEVQNARLRLPILAEEQQVMETIN 274
            ::...|      :..|.|.     |.|.:     :.......::...|..||:....:.:::|:.
 Worm   331 LQNWNPWRASNIDEEPLAFMSMEQISQRIMEKEDFKRGEALDKITAQRGELPVAQYRENIVQTVA 395

  Fly   275 ENPIVIVAGETGSGKTTQLPQFLYE-----AGYAQHKMIGVTEPRRVAAIAMSKRVAHEMNLPES 334
            ||.:.::.||||.||:||:.|||.|     :..|....: |::|||::||::::|||:|......
 Worm   396 ENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAV-VSQPRRISAISLAERVANERGEEVG 459

  Fly   335 EV-SYLIRFEGNVTPAT--RIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLS 396
            |. .|.:||: :.||..  .|.|.|.||||:.:|..  |...|.:|:||.|||.|.||.::.:|.
 Worm   460 ETCGYNVRFD-SATPRPYGSIMFCTVGVLLRMMENG--LRGISHVIIDEIHERDVDTDFVLIVLR 521

  Fly   397 RIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLFKI-----PPPLLKVEARQFPVTIHFQKRTPD 456
            .::    ...:.|::::||||:....|   |..|..     |.|::.:..|.|||...:.:..  
 Worm   522 EMI----STYRDLRVVLMSATIDTDLF---TNFFSSIPDVGPTPVITMHGRTFPVQSFYLEDI-- 577

  Fly   457 DYVAEAYRKTLKIHN--KLPEGGILIFVTGQQEVNQLVRKLRRTFPYHHAPTKDVAKNGKVSEEE 519
                        :||  .:||           |.:|  :|.::..|    |..|        ::|
 Worm   578 ------------LHNLQHMPE-----------EPDQ--KKRKKGGP----PPPD--------DDE 605

  Fly   520 KEETIDDAA---STVEDPKELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEADMH 581
            .:|.:||..   :.:.||            :|.:|.|     .|:.:|:..|  :|....||.::
 Worm   606 GDEEVDDKGRNMNILTDP------------SINESLK-----TAMSRISEKD--IPFGVIEAILN 651

  Fly   582 EQPDEDDEQEGLEEDNDDELG-------------------LEDESGMGSGQRQPLWVLPLYSLLS 627
                 |....|::       |                   ||.:.   .||.....:|||:|.|:
 Worm   652 -----DIASRGVD-------GAVLVFLPGWAEIMTLCNRLLEHQE---FGQANKYEILPLHSQLT 701

  Fly   628 SEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKA 692
            |::|.::|...| |.|..:||||:||||:||..:.||:|..:.|.|:|.....:..|...:.||.
 Worm   702 SQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKT 765

  Fly   693 SADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHF--PF 755
            :..||.|||||:.||:.:.|.|...: :..:|....::.:.|:..:.|.::.:.:..|..|  ..
 Worm   766 NVIQRRGRAGRVRAGYAFHLCSKMRF-EALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKA 829

  Fly   756 PSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLL 820
            ..||....:..:|..|..:|||:    .|.:|    |.||.:::|.|:.|...|:|.|.      
 Worm   830 LQPPPYDMVVESEAVLQAMGALD----RNLEL----TSLGKMLARMPIEPVIAKVLILG------ 880

  Fly   821 PYTVCLVAALSVQEVLIETG---------VQRDEDVAPGANRFHRKRQSWAA---SGNYQLLGDP 873
                   .||....|:.:..         |.|::         |..|.|...   :||  ...|.
 Worm   881 -------TALGAGSVMCDVASAMSFPTPFVPREK---------HHSRLSGTQRKFAGN--KFSDH 927

  Fly   874 MVLLRAVGA---AEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQLTNEINLNVS---DVELGVD 932
            :.::..:..   |...|:.....|||....|....:......|.||.:.:....|   |:...:.
 Worm   928 VAIVSVIQGYREAVQMGASAAEREFCERYSLSNPVLKMTDGARRQLIDVLRNQCSFPEDILFDIS 992

  Fly   933 PELKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRL--KYAY-----NCADMEEPAF 990
            ..:..| |.:...:|.:|:..:...||..|....:...|:...|  ||:.     |..:|:.|:.
 Worm   993 VNVNGP-DRELNLMRSLLVMALYPNVAYYVGKRKVLTIEQSSALINKYSMLVPMNNRQEMDFPSP 1056

  Fly   991 LHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVPLLCNIREVREDPAPRF 1055
            |             :::.|....:.....:|.:  |:||:   ||::                  
 Worm  1057 L-------------LVFTEKVRTRCISCKQMSV--ISAIQ---LLVF------------------ 1085

  Fly  1056 DKTSGKIFCHVDATFGKSGWELPLGEVEMPLSEKACCYFGMFLLDGEVCSRLADFRSKLKSTPAS 1120
              .|.|:.|              :||             |:..:|..:..|:.      .||.|:
 Worm  1086 --GSRKVEC--------------VGE-------------GLVRIDETITIRMN------VSTAAA 1115

  Fly  1121 VIKSWSSMNNKVLRFKRALITKQIHNRQALIDQWNSDPHFLLEEYQNLLYDVA----LSELTPL 1180
            :|.....:        .||:.|...|.::|.....||     .|.:.||.|::    :||..|:
 Worm  1116 LIGLRPCI--------EALLVKSCENPESLAGLNPSD-----AELRQLLRDISSEEFMSEAGPI 1166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kzNP_001284815.1 HrpA 237..1058 CDD:224557 212/894 (24%)
DEXDc 279..418 CDD:238005 53/146 (36%)
P-loop_NTPase 369..>500 CDD:304359 33/137 (24%)
HELICc 619..704 CDD:197757 36/84 (43%)
HA2 774..859 CDD:214852 20/93 (22%)
OB_NTP_bind 915..1039 CDD:285018 26/133 (20%)
rha-1NP_495890.2 DSRM 6..71 CDD:214634
DSRM 173..243 CDD:214634 9/69 (13%)
HrpA 337..>974 CDD:224557 188/754 (25%)
DEXDc 398..539 CDD:238005 53/148 (36%)
Helicase_C 649..739 CDD:278689 30/105 (29%)
HA2 847..931 CDD:214852 25/115 (22%)
OB_NTP_bind 971..1086 CDD:285018 26/153 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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