DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pcx and pcnx2

DIOPT Version :9

Sequence 1:NP_001259183.2 Gene:pcx / 31204 FlyBaseID:FBgn0003048 Length:3417 Species:Drosophila melanogaster
Sequence 2:XP_031758209.1 Gene:pcnx2 / 779541 XenbaseID:XB-GENE-5879835 Length:2024 Species:Xenopus tropicalis


Alignment Length:2865 Identity:787/2865 - (27%)
Similarity:1091/2865 - (38%) Gaps:1149/2865 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSQTLEILRQGVWASLTGGYFYDPHQGVFCNVVHLYLWLYLLCSPFVAYLIFLQYFPSTWLTWC 65
            |.||.|:||||||||:||||:::||....|.|..|||||:.||..|...||    ..|.|..|.|
 Frog     1 MASQVLQILRQGVWAALTGGWYHDPESSQFNNTCHLYLWIVLLVLPLGMYL----GLPPTVFTLC 61

  Fly    66 LYCVITSLTILMVKLANLALHRLYDRAQTMSEGNLKGQFVKVTKETEPRHDDEGGIEMKVIRPGG 130
            |||..|::....:|.....||.::|.                            |||..      
 Frog    62 LYCGFTTVFFAAIKCVIYRLHLMFDE----------------------------GIETN------ 92

  Fly   131 SRISGEQAINEASEENSIMSIDNVNSIIDLKVDVHRKNSSESIELMFYAPSMLSGGSQQDQQSLA 195
                                              |:|....                        
 Frog    93 ----------------------------------HKKKKKT------------------------ 99

  Fly   196 GSASVSKSIRSTGPGGNSSTSAAAQADMFNKYLTVYPEVVEAAGSSAGSADGGSSGGDSRSGAAV 260
             :.|..|.|.||.                                                    
 Frog   100 -TRSKEKEISSTN---------------------------------------------------- 111

  Fly   261 STLGHTGAGTAPAQHVRTGHLSRKCSEVFSRRHRRRLERQSSLDTAAAAANSNAENKLMRNQSDT 325
            .|:.||                                          ..::||||         
 Frog   112 ITINHT------------------------------------------LLSNNAEN--------- 125

  Fly   326 IATAAPSFLHSQPTNKARGQTNPRQHFITSAPSTGIGGGDAPTSSTAVVVIAPASNSLVNPGRSS 390
                                                |||..                        
 Frog   126 ------------------------------------GGGGI------------------------ 130

  Fly   391 RLQRHRSSETHDERLKHQSRGGLFQPILQLPHHSAASSIGALAVLGGGGNVAANDVEDMELGLVR 455
               ||..:.::....|.|..             |..||.|::      |:...:.::|:::    
 Frog   131 ---RHNIALSNHSSAKWQET-------------SCCSSSGSV------GHPCQDSLQDLKV---- 169

  Fly   456 NAGSGGVADACSRALQSWILDPFPDGYLEDDSYTKSDLGIEQPHQPTFRTQHRHHHHHHHLHHHL 520
                  .||...|..|..|:|              .:|.|   |..|     :...|:.|..:::
 Frog   170 ------KADKTIRNRQDGIVD--------------QELCI---HPAT-----QELSHNAHSRYNI 206

  Fly   521 GGAIIRKDPTSTMSALQLAAVTQPGTGGSVTGGGGAAGGGGSAAGMKRRRHSNATSYKHGSSQSN 585
            .|       :...|..||  |....|               |.|......|....:.||.:.:.:
 Frog   207 VG-------SGMPSEAQL--VINENT---------------SQANSSGEEHFKGINEKHLNVKFS 247

  Fly   586 KSSLVGGGGSRGPSGEAGTSGGAGGTGGVRRIKSAALEVL--------C---PQPSVSNLSPHPN 639
            |:.|                 .|.......|..|..:.|:        |   |:|.       ||
 Frog   248 KNYL-----------------KAENENDKYRENSVKVHVMEEVVETDVCGKFPRPM-------PN 288

  Fly   640 SVEAISGQQQMRNPLPPPSKSLVRNQHLN-------LYPTQGYGDGTPSAGGGGPGNSSTCSSLF 697
            ..|.|.....|.|.|...| .|.|:..||       |....|...|....  .|..||...|.| 
 Frog   289 VEEPIKILITMNNDLDMMS-GLKRSLSLNDLRKDNILRLDSGVKQGNKQF--TGKDNSKIKSEL- 349

  Fly   698 FGSSSACGSTTALIEPPVYPIVEHSDEKTAHEEHGDDCLGIGQGNADDDDEVDDVPIRRRTRALG 762
             ...|.|....|     ||           |.....|||                  .|.|....
 Frog   350 -PIKSTCMDNYA-----VY-----------HMHKSSDCL------------------NRNTSCSP 379

  Fly   763 CSQTHYSVESDVGGFLADEVGADEDVFKDFDDNLEHILSELQQT------HNQLDDVLKTHDLHH 821
            || .:.|...|.........|..:.|.:|||.|   |:.|.:.|      .|..|.|.||.....
 Frog   380 CS-GYESSNLDCSNIANSSKGVPKFVSRDFDFN---IIIESKVTVCTDLKMNPHDCVSKTATEKQ 440

  Fly   822 HSHLHHHKAASVEGAGPSGGSVAVGVSAGNDDEDEETEDNNTGSRSPLLNDRNRQPATLREIQAD 886
            |:                          |....|..|:|.|:.:   :..|:   |.||...::|
 Frog   441 HT--------------------------GVQSLDSGTDDKNSNN---IFYDK---PKTLPLSKSD 473

  Fly   887 KQLRQ-ELSHQSG-----AVIPAPN----PPVPIRSEADSGCPSSDCEQVSASSKDQLLSGIELE 941
            .:.:: :..::|.     :::.:.|    ||...|.|            :..|..|         
 Frog   474 LEAKEGQFPNESNVTEFISLLESINISKAPPFNFRRE------------LKESKGD--------- 517

  Fly   942 LQQYQILQRCQLDEEQPCTSKMAAKSLGAIPKVVKYREVDELRRRRRGGSPADAAEAGNEFALVK 1006
                    ||..|....|...  :.|:....:|.:..:.|.|..:|   .|::..:         
 Frog   518 --------RCLKDVAFVCLKD--STSMDQDVRVTEEDKCDLLPEQR---FPSEKCK--------- 560

  Fly  1007 QTKQASRNSSSSNSTHSISLTDSLTADIHKMLWLMHGGAVDDRGRPITGTSADGTPIPASSSLVP 1071
                                 |||..|:|                              |.::.|
 Frog   561 ---------------------DSLYQDLH------------------------------SVNMHP 574

  Fly  1072 PNMSNAHFQFYQ-----------DAIQALQGTHPT--SGSSVEHM-TNIELARDKLRLDAK---- 1118
            ...||.....||           ..:|.|.|:..:  .|.|:|.| ..::...||:....|    
 Frog   575 DQSSNPRKIIYQLTHAHPSQQDSSVLQILSGSEASIPEGKSIEEMNVYVDNHGDKISCFVKAGSP 639

  Fly  1119 --LMCE-------------QLVAAAEANSGVRGNTLATQQMTQQQVGMLMRGGSSSRHPSSAPFS 1168
              |.|:             :|.:|:|:...:.|   .::.::.|:|..::  |..:         
 Frog   640 SDLQCQNANPECISLEHELELSSASESEEHISG---VSEALSSQEVSHIL--GRKA--------- 690

  Fly  1169 VQGLINVIRSERPAARSQLDALQQLSDAAAALAANASEAASVSASGAGGGASSGGGGVLSALGLA 1233
                    .||.|...|| :..:.|.|.                                     
 Frog   691 --------NSETPEPLSQ-EIKESLCDK------------------------------------- 709

  Fly  1234 NHPSNQISQISQLSQMSQPMLNVDGHFAPYCDYWRPACLLSATEKPAAPKSFYKYRF---KWCGQ 1295
                   ||||.|.:                                   ..||.|.   ||   
 Frog   710 -------SQISSLRE-----------------------------------ELYKCRIFPGKW--- 729

  Fly  1296 EHEFKIAMDRLELLALFDRDLHWMHVLLASLLCTLVACLGAAILQHDHYKDLCALLFCAVIAGAQ 1360
               .|:..|||.||||.||.......:|..:|..||:.||..:|.....||:..|.||.|||..|
 Frog   730 ---IKVWFDRLTLLALIDRTEDVGENVLGVILAILVSFLGYLVLSQGLCKDIWILQFCIVIASCQ 791

  Fly  1361 YSLVKSVQPDAASPVHGFNKTVAYSRAIYFCLAGGMLLLLKRLDTDYGERTPD---PVVFFGMRY 1422
            |||:||||||.|||:||:||.:.|||.:|||:..|::|||     |.|.:|.:   ||: :|:..
 Frog   792 YSLLKSVQPDPASPIHGYNKIITYSRPVYFCILCGLILLL-----DSGAQTTNMHLPVL-YGIYL 850

  Fly  1423 SPADVVALLLQALYILLLCFPIIFSVGLCPQINTFLMYLLEQIDMHVFGGNAASSLLGSFLCVVR 1487
            ..::...:....:.:|:.|||:|..:||.||||||.:|.:||||..:|||:||..|..:...:.|
 Frog   851 FSSNSFGIARDFVIMLVHCFPLISLLGLFPQINTFSIYFMEQIDRLIFGGSAALGLASALYALCR 915

  Fly  1488 SVLAVMLLYGPLYGALDEQRGTQY--ILFSIFCAMLVPLGYHLSRCASDFSHLWRLIKTCIVSTY 1550
            |.|||.:|||....|:.|....::  .|||.||.:|:.|.|||||.:||.|.|..|||       
 Frog   916 SSLAVAILYGFCLSAVKEPWDIRHTPALFSAFCGLLIALSYHLSRQSSDPSVLISLIK------- 973

  Fly  1551 RDDEDEDLSQMQHIATGTVTGSGTANSTALQLTTSTPKQHRQTDVKTEHEQIELSSLEKLTVNEE 1615
                                                                             
 Frog   974 ----------------------------------------------------------------- 973

  Fly  1616 HHEKDHGADDQLETDQDLPLQQKHSKSKTSSLGSSQQTLGKTISSSKRAITASSSCTSIGTGEPA 1680
                                                                   |.|:      
 Frog   974 -------------------------------------------------------CKSL------ 977

  Fly  1681 VEAGALTEEAVEGEEQRRNTLAGEVGSKHELAENYDQAAKIDECEDKISSSSATNPGDMSTLTAG 1745
                                                  :|:  |::..|||              
 Frog   978 --------------------------------------SKV--CKEHCSSS-------------- 988

  Fly  1746 AGTATTDATPACLEADPDAEAEAPADEKQHQGILGTGTGTGTGTTEASENGSGGGANGNTNSNGT 1810
                         |.:.|                                               
 Frog   989 -------------EQEQD----------------------------------------------- 993

  Fly  1811 GNDLPDPLPRKLQATVTTRLKNDLVVMTLLAVSVLGLHCSTVFTALQPDLNVVLYSFIGVLGLLL 1875
                 ||||.|:|.::...||:||::..::|:....:..||||.:|:|.|..|||.....:||::
 Frog   994 -----DPLPEKMQRSLKEILKSDLIICIIVAILSYAISASTVFLSLRPFLTYVLYGLALTVGLVI 1053

  Fly  1876 HYIVPQMRKHMPWLCFSRPLLRQREFGQFEVLNAPKIMWFEKLYIYLSVLERNVLFPLLAISSLT 1940
            |||:||:|||.|||..|.|:|:.:|..:.|||:|..:.||||||::|...|:..|:|.:.::::|
 Frog  1054 HYIIPQLRKHHPWLWISHPILQSKEHQEREVLDAAHLTWFEKLYLWLLCFEKYFLYPSIILNAVT 1118

  Fly  1941 ADSQLI--VAKFGLPWGTLIVAICALKFVRNAYSDPTNQYLIIIFTVLLFRIDFAMATETFIIDY 2003
            .|:..|  ..:||:.:.||::.:..:|.:|:::.:..:||:|:.||:|.|:.|::..:|:|:|::
 Frog  1119 VDAFSISKYKRFGIHFDTLLITLAGMKLLRSSFCNSLHQYIILGFTLLFFQFDYSSISESFLINF 1183

  Fly  2004 FFVSLAFRKCCDFLLKLQFIVTYIAPWQITWGSAFHAFAQPFSVPHSAMLFLQAAISAVLSTPLN 2068
            |.:|:.|.|..|.|.|||::.||||||||.|||:||.|||..::|||||||||...:::.||||:
 Frog  1184 FIMSILFDKLWDLLEKLQYVFTYIAPWQIAWGSSFHVFAQLLAIPHSAMLFLQIFATSIFSTPLS 1248

  Fly  2069 PFLGSAIFLTSYVRPIKFWERDYNTRRIDHSNTRLSSQLERDLGADDNNLNSIFYEHLTRSLQHS 2133
            |||||.||:.|||||:||||::|||:|:|||||||.:|:|:|.|.||||||||||||||||||.|
 Frog  1249 PFLGSVIFIASYVRPVKFWEKNYNTKRVDHSNTRLVNQIEKDAGNDDNNLNSIFYEHLTRSLQKS 1313

  Fly  2134 LCGDLLMGRWGNVNQGDCFVLASDDLNCLVHIIELGNGLCTFQMRGLEFRGTYCQQREVEAITED 2198
            |||||::|||||.:.||||:|.||.||.|||:||:|||..|||:||||||||||||||||||||.
 Frog  1314 LCGDLVLGRWGNYSSGDCFILTSDYLNALVHLIEIGNGFVTFQLRGLEFRGTYCQQREVEAITEG 1378

  Fly  2199 VEDNDGCCCCDPGHLPQLLSANAMFSTRWLAWQVVAAQYVIEGYSISDNLASATLQVFEYRKVLI 2263
            .|||:.||||.|||||.:||.||.|:.|||.|:|...::::|||::.||.|:..||||:.|||||
 Frog  1379 NEDNEDCCCCKPGHLPHMLSCNAAFNLRWLTWEVTRTRFILEGYNVIDNNAATMLQVFDLRKVLI 1443

  Fly  2264 TYYIKSIIYYVVKNPKLEQWLASGPIQDALQHTLSRQFVDLD-PIFNFNLDEDFDFRAVGITRSS 2327
            .||||||||:...:||:.:||....||.|||.......|:.| .:|:.|:|||:.....||||:|
 Frog  1444 KYYIKSIIYFTASSPKIMKWLKDESIQKALQPYTRWHHVENDLAMFSINVDEDYIPCLQGITRAS 1508

  Fly  2328 FCYVYLKWINYCVDMRRDANSMGGAPPAQAPAAAGGASSAPATAGVAPPAPVTPAHNDSKSTPNL 2392
            ||.|||.||.:|                                                     
 Frog  1509 FCSVYLDWIQFC----------------------------------------------------- 1520

  Fly  2393 SAHGGQAGPSSGQSKSQSQQQLRRPQKSVAQETSVGGGGVVVGGTTVPGTGGVTGGGGDPQLSSS 2457
                                                                             
 Frog  1521 ----------------------------------------------------------------- 1520

  Fly  2458 HSFANISRQTSESAPGLGGYVAYMDQNVFVKLAKSSTTTGAGAGAPTSRKESQEKPALRLKLASV 2522
                                                    |..|              ::|:| .
 Frog  1521 ----------------------------------------ANKG--------------KMKVA-C 1530

  Fly  2523 GKDAPLVSLCLALGLLARRSLATASHSALTGVEFFLHGLHALFKGDFRITSPRDEWVFADMELLH 2587
            .:|:.|::||..|.:|.||.|.||:|.....::.||||||.||||||||.: |||||||||:|||
 Frog  1531 DEDSSLITLCFGLCILGRRVLGTAAHHMSFSLDSFLHGLHTLFKGDFRIAA-RDEWVFADMDLLH 1594

  Fly  2588 SVVAPAVKMALKLQQDHITNPDEFLDPHALYDAIDNCSNELVISHEADPVWRSAVLRGAPNLLAL 2652
            :|||||::|:|||.|:....|:|:.|..||:|||.....::||.||.||.||.|||.....||.|
 Frog  1595 TVVAPAIRMSLKLHQNQFACPEEYDDFSALFDAIQQFEKKVVICHEGDPAWRKAVLSNREELLTL 1659

  Fly  2653 RHVMEDGSDEYRIIRLTKRCLSFRVIKLNRECVRGLWAGQQQELIYLRNRNPERGSIQNAKQALR 2717
            |||:::|:|||::|.|.|..|||:|||:|:|||||||||||||||:||||:||||||||.||.||
 Frog  1660 RHVVDEGTDEYKVIMLHKSYLSFKVIKVNKECVRGLWAGQQQELIFLRNRDPERGSIQNNKQVLR 1724

  Fly  2718 NIINSSCDQPIGYPIYVSPLTTSYADTNAQLCEVIGGAITLDTIRHTVLGWWHRIRERCRQGCSS 2782
            |:||||||||:|||:|||.||.||..|:.:|..:.|..|:.|:||......|.|:|:.|.....:
 Frog  1725 NLINSSCDQPLGYPMYVSSLTISYLGTHERLRNMWGEPISFDSIRTWFQKKWIRMRKECDTSHHT 1789

  Fly  2783 GSALE 2787
            |..:|
 Frog  1790 GGNIE 1794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pcxNP_001259183.2 Pecanex_C 2523..2746 CDD:282845 138/222 (62%)
Loricrin <2779..>2842 CDD:292475 2/9 (22%)
pcnx2XP_031758209.1 Pecanex_C 1530..1753 CDD:398632 138/223 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 336 1.000 Domainoid score I1126
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D41206at33208
OrthoFinder 1 1.000 - - FOG0002108
OrthoInspector 1 1.000 - - otm47495
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3574
SonicParanoid 1 1.000 - - X1397
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.040

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