DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pcx and B0511.12

DIOPT Version :9

Sequence 1:NP_001259183.2 Gene:pcx / 31204 FlyBaseID:FBgn0003048 Length:3417 Species:Drosophila melanogaster
Sequence 2:NP_001251456.1 Gene:B0511.12 / 172961 WormBaseID:WBGene00015237 Length:2245 Species:Caenorhabditis elegans


Alignment Length:3400 Identity:869/3400 - (25%)
Similarity:1237/3400 - (36%) Gaps:1308/3400 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSQTLEILRQGVWASLTGGYFYDPHQGVFCNVVHLYLWLYLLCSP----FVA-----------Y 50
            :|:..:|::|||:|||||||::|:|...:|||.:|||:|..|:..|    |||           |
 Worm     3 VGTHIIEVIRQGIWASLTGGWYYEPGFSIFCNTMHLYVWFILIILPLILGFVASQGVSLVFAASY 67

  Fly    51 LIFLQYFPSTWLTWCLYCVITSLTILMVKLANLALHRLYDRAQ-TMSEGNLKGQFVKVTKETE-P 113
            ..|:.:|         :.||.|:...        ||.::|... .:....:.....::.:|:| |
 Worm    68 TGFIVFF---------FTVIKSVVAY--------LHMIFDTTDPVVVTRTINDSVDELYRESEQP 115

  Fly   114 RHDDEGGIEMKVIRPGGSRISGEQAINEASEENSIMSIDNVNSIIDLKVDVHRKNSSESIELMFY 178
            ..|    :||..:|..|..:.|.:...:...|.|:..          ::..:...:...:|...:
 Worm   116 PLD----VEMIELRDMGYNLRGSERALDGRREPSVRE----------EIAANMARARRHLEAERH 166

  Fly   179 APSMLSGGSQQDQQSLAGSASVSK------SIRSTGPGGNSSTSAAAQADMFNKYLTVYPEVVEA 237
            |      .|.::.||.......||      |..||     :|.:|.|.|::.....|:..|..|.
 Worm   167 A------DSARESQSTPIPQITSKFWDFVISNSST-----TSVNATALAEVRKVLNTIEDESTET 220

  Fly   238 AGSSAGSADGGSSGGDSRSGAAVSTLGHTGAGTAPAQHVRTGHLSRKCSEVFSRRHRRRLERQSS 302
            ......|.                                                  |.:|.|.
 Worm   221 ESEPTSST--------------------------------------------------RRQRSSP 235

  Fly   303 LDTAAAAANSNAENKLMRNQSDTIATAAPSFLHSQPTNKARGQTNPRQHFITSAPSTGIGGGDAP 367
            :.........|..::  .....||.|  |....|.|:|..|...|..        |||      |
 Worm   236 MKVVYEDEQPNIRSR--STSPPTIVT--PKRKRSVPSNLRRQLENQE--------STG------P 282

  Fly   368 TSSTAVVVIAPASNSLVNPGRSSRLQRHRSSETHDERLKHQSRGGLFQPILQLPHHSAASSIGAL 432
            ::|              :..|||.....:..:| ||:|.|              :|.....    
 Worm   283 STS--------------SERRSSDPTIRKKGKT-DEQLDH--------------YHEKIRE---- 314

  Fly   433 AVLGGGGNVAANDVEDMELGLVRNAGSGGVADACSRALQSWILDPFPDGYLEDDSYTKSDLGIEQ 497
                                ..||                  :....:|..|:|...:.|     
 Worm   315 --------------------KYRN------------------IQKIQEGVEEEDEDEEDD----- 336

  Fly   498 PHQPTFRTQHRHHHHHHHLHHHLGGAIIRKDPTSTMSALQLAAVTQPGTGGSVTGGGG------- 555
                                          |..||.|||..::..|.....| ||...       
 Worm   337 ------------------------------DMPSTSSALPSSSRRQSRRRSS-TGATNRKRKYTR 370

  Fly   556 AAGGGGSAAGMKRRRHSNATSYKHGSSQSNKSS------LVGGGGSRGPSGEAGTSGGAGGTGGV 614
            .||.....||...::.|      |.||:|..||      :|..|....|:....::..|.....:
 Worm   371 RAGSPAVFAGNLMKKDS------HESSRSMPSSVGWTPVVVSLGDVDRPTTSRYSADDADNGADI 429

  Fly   615 RRIKSAALEVLCPQPSVSNLSPHPNSVEAISGQQQMRNPLPPPSKSLVRNQHLNLYPTQGYGDGT 679
            |...:..||.|        :..||.:::||...:..|.....||.....:..:.|.|       .
 Worm   430 RGEITKFLEDL--------IDKHPETLDAIENVRMSRLGRGRPSSESHDSAPVELAP-------L 479

  Fly   680 PSAGGGGPGNSSTCSSLFFGSSSACGSTTALIEPPVYPIVEHSDEKTAHEEHGDDCLGIGQGNAD 744
            |.:...||..|                                   |||:               
 Worm   480 PPSTSAGPSTS-----------------------------------TAHQ--------------- 494

  Fly   745 DDDEVDDVPIRRRTRALGCSQTHYSVESDVGGFLADEVGADEDVFKDFDDNLEHILSELQQTHNQ 809
            :.|.|                .|        |..|                :.|:|....::::.
 Worm   495 NSDRV----------------AH--------GIFA----------------VPHVLRSAARSNSF 519

  Fly   810 LDDVLKTHDLHHHSHL----HHHKAASVEGAGPSGGSVAVGVSAGNDDEDEE------TEDNNTG 864
            :       |.|.||.:    .||.|...|..  |.|:|..     ..|||..      .|::..|
 Worm   520 I-------DWHSHSQVVSSSQHHIAQGHEDT--SQGAVHT-----FQDEDGNWWTYTFDENSGVG 570

  Fly   865 SRSPLLNDRNRQPATLREIQADKQLRQELSHQSGAVIPAPNPPVPIRSEADSGCPSSDCEQVSAS 929
            :..||.:.|    |.|..|..:::...|.:.:.       .||..:....:|...|::.|:...:
 Worm   571 TAQPLGSGR----AVLELIHREREKNPESARKL-------FPPAELEVLPESMYDSTEDEKGEKT 624

  Fly   930 SKDQLLSGIELELQQYQILQRCQLDEEQPCTS-KMAAKSLGAIPKVVKYREVDELRRRRRGGSPA 993
            |.:.                    |.:||.|| ..||.|:..:|                     
 Worm   625 SDED--------------------DGKQPSTSAAAAASSVTVLP--------------------- 648

  Fly   994 DAAEAGNEFALVKQTKQASRNSSSSNSTHSISLTDSLTADIHKMLWLMHGGAVDDRGRPITGTSA 1058
                                 |:|::.|.::.|  .||.                |.|.::.:| 
 Worm   649 ---------------------STSNSQTQTVQL--PLTR----------------RERALSSSS- 673

  Fly  1059 DGTPIPASSSLVPPNMSNAHFQFYQDAIQALQGTHPTSGSSVEHMTNIELARDKLRLDAKLMCEQ 1123
                          |.|:.:.              ||..|||.|                     
 Worm   674 --------------NESSTYM--------------PTLPSSVFH--------------------- 689

  Fly  1124 LVAAAEANSGVRGNTLATQQMTQQQVGMLMRGGSSSRHPSSAPFSVQG--LINVIR--SERPAAR 1184
                  |.||    |.||:             .||:|......||..|  |.|.:|  .:|.|  
 Worm   690 ------APSG----TGATR-------------ASSARGSQMVCFSSNGSRLRNTVRDGDDRSA-- 729

  Fly  1185 SQLDALQQLSDAAAALAANASEAASVSASGAGGGASSGGGGVLSALGLANHPSNQISQISQLSQM 1249
               |::.|:                                               .||.:|.:.
 Worm   730 ---DSMWQM-----------------------------------------------EQIMELIEN 744

  Fly  1250 SQPMLNVDGHFAPYCDYWRPACLLSATEKPAAP-------------KSFYKYRFKWCGQ-EHEFK 1300
            :....|    |.|              |.|:.|             ||:| |..|...: :..|.
 Worm   745 THSRRN----FGP--------------EMPSLPITNLDRRASSNVRKSYY-YPMKMFPKAQKNFN 790

  Fly  1301 IAMDRLELLALFDRDLHWMHVLLASLLCTLVACLGAAILQHDHYKDLCALLFCAVIAGAQYSLVK 1365
            :.:||:.:..||||:.....:|...:|.|:||.|...::....:.|...:.||.|:|.||:||:|
 Worm   791 LKVDRMSVDRLFDRNHTIWSLLFDIVLATIVALLAVLLIDARIFYDYSLVAFCFVVASAQFSLLK 855

  Fly  1366 SVQPDAASPVHGFNKTVAYSRAIYFCLAGGMLLLL------KRLDTDYGERTPDPVVF------F 1418
            ||||||:||:||||...:|:|.||||:....||.:      |.:|     ..|:.:.:      .
 Worm   856 SVQPDASSPIHGFNWVASYNRPIYFCIMAMGLLYIHQVAGGKEID-----ENPEELAWNWNPFRL 915

  Fly  1419 GMRYSPADVVALLLQALYILLLCFPIIFSVGLCPQINTFLMYLLEQIDMHVFGGNAASSLLGSFL 1483
            .|..|.|.::| :...|.||:|..|:.|::|..||.||...::.|||:||:|||.|:.|:..:.:
 Worm   916 HMMTSSAILIA-VRDLLSILILLLPVAFTLGWLPQFNTLAHHVAEQIEMHIFGGTASFSVFSACV 979

  Fly  1484 CVVRS---VLAVMLLYGPLYGALDEQRGTQYILFSIFCAMLVPLGYHLSRCASDFSHLWRLIKTC 1545
            .:::|   .:|:.:|....|  ......||..|||.|.|..|.:.|.|||.:|: .:|..::...
 Worm   980 QLIKSSVFYVALCVLCRVAY--TFSPTSTQNPLFSTFVATSVAVSYLLSRMSSN-QNLMVILFDI 1041

  Fly  1546 IVSTYRDDEDEDLSQMQHIATGTVTGSGTANSTALQLTTSTPKQHRQTDVKTEHEQIELSSLEKL 1610
            |.|.:|                                                           
 Worm  1042 ITSPFR----------------------------------------------------------- 1047

  Fly  1611 TVNEEHHEKDHGADDQLETDQDLPLQQKHSKSKTSSLGSSQQTLGKTISSSKRAITASSSCTSIG 1675
                                       ||       |.|.|:                       
 Worm  1048 ---------------------------KH-------LDSEQE----------------------- 1055

  Fly  1676 TGEPAVEAGALTEEAVEGEEQRRNTLAGEVGSKHELAENYDQAAKIDECEDKISSSSATNPGDMS 1740
                                                                             
 Worm  1056 ----------------------------------------------------------------- 1055

  Fly  1741 TLTAGAGTATTDATPACLEADPDAEAEAPADEKQHQGILGTGTGTGTGTTEASENGSGGGANGNT 1805
                                |.|| |.||:        :.|..                      
 Worm  1056 --------------------DEDA-ANAPS--------ISTAR---------------------- 1069

  Fly  1806 NSNGTGNDLPDPLPRKLQATVTTRLKNDLVVMTLLAVSVLGLHCSTVFTALQPDLNVVLYSFIGV 1870
                      |.:|:.::.||..|.:.||:....|.....|||.:::|||.:|.....:......
 Worm  1070 ----------DEMPKMVRKTVGERARYDLIFSIFLVAFFFGLHSTSLFTATEPYFTRAISGVCVC 1124

  Fly  1871 LGLLLHYIVPQMRKHMPWLCFSRPLLRQREFGQFEVLNAPKIMWFEKLYIYLSVLERNVLFPLLA 1935
            ||:|.||:.||.|.|.||...|.|||:..|..|||..:|.|:|:||.:::::..:|||:::|||.
 Worm  1125 LGVLNHYLYPQFRSHTPWRTVSSPLLKSAEHRQFESPDAAKLMYFEAIHLWMVAIERNIVYPLLI 1189

  Fly  1936 ISSLTADSQLIVAKFGLPWGTLIVAICALKFVRNAYSDPTNQYLIIIFTVLLFRIDFAMATETF- 1999
            ||.:|.::..:.|    ||  :|:.:..|:.:|..:|.|...|:.:....|....|.....:.. 
 Worm  1190 ISMVTENNWAVPA----PW--IIIPLICLRLLRGGFSQPQLMYIPVAVACLAAAFDLKKVIDIEY 1248

  Fly  2000 ------------IIDYFFVSLAFRKCCDFLLKLQFIVTYIAPWQITWGSAFHAFAQPFSVPHSAM 2052
                        ||.|..||: |.|..:..||:.||:.|:|||||:||||||||||||||||||:
 Worm  1249 NGKSLTSWNLLPIIMYICVSV-FPKVVELYLKIAFILAYVAPWQISWGSAFHAFAQPFSVPHSAL 1312

  Fly  2053 LFLQAAISAVLSTPLNPFLGSAIFLTSYVRPIKFWERDYNTRRIDHSNTRLSSQLERDLGADDNN 2117
            :.:|..||:::|.||||||||:.|.:|||||:||||:||||:|.|.|..|||||::|....||:|
 Worm  1313 IAIQTVISSIISAPLNPFLGSSFFTSSYVRPVKFWEKDYNTKRTDASTMRLSSQIDRGPMLDDSN 1377

  Fly  2118 LNSIFYEHLTRSLQHSLCGDLLMGRWG-NVNQGDCFVLASDDLNCLVHIIELGNGLCTFQMRGLE 2181
            ||::||||||||||.||.|||.||||. :|..||||||||..||.||||||:|||..|||:||||
 Worm  1378 LNAVFYEHLTRSLQKSLAGDLAMGRWATSVQPGDCFVLASFYLNSLVHIIEVGNGFVTFQLRGLE 1442

  Fly  2182 FRGTYCQQREVEAITEDVEDNDGCCCCDPGHLPQLLSANAMFSTRWLAWQVVAAQYVIEGYSISD 2246
            ||||||.||||||||||:.|..|.|||.||.||..||.|..::.|||||:||:.:|:|:||||||
 Worm  1443 FRGTYCHQREVEAITEDIRDGSGFCCCSPGSLPGFLSFNTAWNLRWLAWEVVSGKYIIDGYSISD 1507

  Fly  2247 NLASATLQVFEYRKVLITYYIKSIIYYVVKNPKLEQWLASGPIQDALQHTLSR-QFVDLDPIFNF 2310
            |.|...|||.|.|::|:|.|||.||||...:.|..|||....:|.|::..:.. ::.|:|.||..
 Worm  1508 NSAVNLLQVHELRRLLVTLYIKCIIYYTFTSTKFRQWLRDDTVQTAIRSVIENPRYTDVDSIFCS 1572

  Fly  2311 NLDEDFDFRAVGITRSSFCYVYLKWINYCVDMRRDANSMGGAPPAQAPAAAGGASSAPATAGVAP 2375
            ..|||:|....||:||||..:||.||.||::.|.:.                             
 Worm  1573 TNDEDYDTVESGISRSSFKSMYLPWIMYCIEKRGEC----------------------------- 1608

  Fly  2376 PAPVTPAHNDSKSTPNLSAHGGQAGPSSGQSKSQSQQQLRRPQKSVAQETSVGGGGVVVGGTTVP 2440
                                                          .||                
 Worm  1609 ----------------------------------------------VQE---------------- 1611

  Fly  2441 GTGGVTGGGGDPQLSSSHSFANISRQTSESAPGLGGYVAYMDQNVFVKLAKSSTTTGAGAGAPTS 2505
                                   .:...|.|                                  
 Worm  1612 -----------------------DKYDHEEA---------------------------------- 1619

  Fly  2506 RKESQEKPALRLKLASVGKDAPLVSLCLALGLLARRSLATAS---HSALTGVEFFLHGLHALFKG 2567
                                   |:||..|.|:|||||.|||   ||  :..|.||:|||:||||
 Worm  1620 -----------------------VTLCFLLSLVARRSLGTASFNRHS--SAAESFLYGLHSLFKG 1659

  Fly  2568 DFRITSPRDEWVFADMELLHSVVAPAVKMALKLQQDHITNPDEFLDPHALYDAIDNCSNELVISH 2632
            |||||..||||||.||::|..||:|||||||||.|||....:||.:...||..|.....::.|||
 Worm  1660 DFRITCQRDEWVFTDMDMLRCVVSPAVKMALKLHQDHFAQFEEFDENDGLYTVIGEYQTKMFISH 1724

  Fly  2633 EADPVWRSAVLRGAPNLLALRHVMEDGSDEYRIIRLTKRCLSFRVIKLNRECVRGLWAGQQQELI 2697
            |.||.||.|:|...|:||||||:.:||.|:|:||.|.:..|:.|||||||||||..|||||||||
 Worm  1725 EQDPGWRQAILANTPSLLALRHIYDDGQDDYKIIMLNQMHLNMRVIKLNRECVRAFWAGQQQELI 1789

  Fly  2698 YLRNRNPERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYADTNAQLCEVIGGAITLDTIR 2762
            :||||||||||||||:|.|||:||||.|.|:||||||||||||:.::::|:.:|.|...|.:..|
 Worm  1790 FLRNRNPERGSIQNARQVLRNMINSSADLPVGYPIYVSPLTTSHIESHSQIHKVFGPTFTFEGFR 1854

  Fly  2763 HTVLGWWHRIRERCRQGCSSGSALEPHPGSGPVQLGACNFGSGGSVVGAASTATGVGASTGSGLG 2827
            ......|:|:|...                                                   
 Worm  1855 QLGQNVWNRLRNHF--------------------------------------------------- 1868

  Fly  2828 VAAPGTAGSTGGE--------SGDLAPVFISAPLYNTLTVNSYYSVRPGNVPGGPIP--GNLGGN 2882
                |.:|||...        |..:.|.....|....:|:.|.......:.||||.|  |..|| 
 Worm  1869 ----GPSGSTSAHQQQQQQQASQSIVPTPTPVPPVMQITIPSATPSGISSAPGGPNPSSGAPGG- 1928

  Fly  2883 YVSDSLAVVRGGLAVMPVKPTSTTLIAGLLNRERDETSGSGIMGAGASGPTRATSSGGVRSRRPE 2947
                    :|....|.|| |:|     |..:.|:|......::....:.|               
 Worm  1929 --------LRAHFHVGPV-PSS-----GRSDGEKDTDEEQEMIVLTMTTP--------------- 1964

  Fly  2948 VGSSRGRDHERRATLPIASGGAGGEPGKDLTAPQTQVEHEPSPRSTKLSSSSGSLGLGMGVGLGN 3012
               .:||..|....          |..||.|| :..|.| |..|.....|.:..:.|        
 Worm  1965 ---RQGRRLENSIV----------EMTKDGTA-RVSVLH-PKTRPPLDDSIAAPVTL-------- 2006

  Fly  3013 IITTPGDYPRK---TKGPICLTAVDTGTSSSAAEGKPAGSGTVAGTGVGGVIRKPRIEIFKKVII 3074
              |||....|:   ...|...|.:.:|...:..:....||.                     .:|
 Worm  2007 --TTPPQTERERAIMNRPNFQTLLKSGQVINGNQEMGIGSW---------------------ALI 2048

  Fly  3075 VDDTGIY-----------DCLDIIDAVVWPTERMRNNGGRLSWKDWEPSAGMVGHVVHCWTPNHK 3128
            :|...|:           :||     ||||.|.:::..||.||. ::||.||.|.:|:.|.|:|.
 Worm  2049 IDSEQIFKYLNEPLKSSGECL-----VVWPDELVQHMSGRGSWL-FQPSRGMAGKIVYTWYPSHP 2107

  Fly  3129 DIRFRSHVNRYVYLVEI---GDHYVPVEELGLR-----EYNQ--IMGSTEEMANSRRSSIQRDFH 3183
            ....||||..:::|:.:   .:..|||.|.|||     :.|.  :.|.|.:.        |::|.
 Worm  2108 LRNRRSHVGDHIHLISLPLMPNGLVPVAEKGLRLLAPHDINTLGLSGCTTQE--------QQEFQ 2164

  Fly  3184 EYNIQLKLAGLAPIIGGGESSTATTSDASK--------SHKAKIRAVSSSSS-----------ED 3229
            ...|.:.:  |:.|:.|  :.:|.||...|        ..:.:.|...:|||           |.
 Worm  2165 TRYIDVLI--LSKIVTG--TVSARTSFPKKPPIPPPNIRDRERDRETGTSSSALPTTTASNPLET 2225

  Fly  3230 EDTSSTRSIPLPQGDDGDLT 3249
            ...|||.|:||...:...||
 Worm  2226 TGNSSTDSVPLETSELPALT 2245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pcxNP_001259183.2 Pecanex_C 2523..2746 CDD:282845 139/225 (62%)
Loricrin <2779..>2842 CDD:292475 4/70 (6%)
B0511.12NP_001251456.1 Pecanex_C 1612..1839 CDD:368258 141/285 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162198
Domainoid 1 1.000 736 1.000 Domainoid score I38
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1087 1.000 Inparanoid score I124
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002108
OrthoInspector 1 1.000 - - oto19909
orthoMCL 1 0.900 - - OOG6_104101
Panther 1 1.100 - - LDO PTHR12372
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3574
SonicParanoid 1 1.000 - - X1397
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.010

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