Sequence 1: | NP_001284813.1 | Gene: | Vinc / 31201 | FlyBaseID: | FBgn0004397 | Length: | 961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_054706.1 | Gene: | VCL / 7414 | HGNCID: | 12665 | Length: | 1134 | Species: | Homo sapiens |
Alignment Length: | 1148 | Identity: | 469/1148 - (40%) |
---|---|---|---|
Similarity: | 647/1148 - (56%) | Gaps: | 202/1148 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPVFHTKTIESILDPVAQQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSS 64
Fly 65 DDKILRQDMPSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESE 129
Fly 130 VRKIIQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRCL 194
Fly 195 EQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYDEDTSEL 259
Fly 260 DNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL----------- 313
Fly 314 ----------------PQDSYPI------------------------------------------ 320
Fly 321 -------------------------RKLAD----------------EVTAMANTLCELRQEGKGQ 344
Fly 345 SPQAESLVRGIRDRMGELKSLVHQAVLGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGER 409
Fly 410 AINLIVEEGRKVAEGCPGHQKAEIQQLCDEVERLKRQAA-------GSGPAAKQAAKQLTQKLYE 467
Fly 468 LKAAIQNALVNRIVQDFMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMV 532
Fly 533 AAGGACGNKKIAEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRT 597
Fly 598 LCDQATDPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSED 662
Fly 663 PVFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDAIAPPQPP 727
Fly 728 PLPTSLPPPIPELSALHLSNQNAERAPPRPPLPREGLAPVRPPPPETDDED-------------- 778
Fly 779 ---------------------------------------------------EGVFRTMPH---AN 789
Fly 790 QPILIAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEASE 854
Fly 855 DVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE-ATEMLV 917
Fly 918 GNAQNLMQSVKETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 960 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vinc | NP_001284813.1 | Vinculin | 63..960 | CDD:279395 | 424/1083 (39%) |
VCL | NP_054706.1 | N-terminal globular head. /evidence=ECO:0000269|PubMed:20484056 | 1..835 | 313/837 (37%) | |
Vinculin | 66..1134 | CDD:395830 | 424/1081 (39%) | ||
Talin-interaction. /evidence=ECO:0000250|UniProtKB:P12003 | 168..208 | 16/39 (41%) | |||
3 X 112 AA tandem repeats. /evidence=ECO:0000255 | 259..589 | 74/332 (22%) | |||
Interaction with ACTN4. /evidence=ECO:0000269|PubMed:15988023, ECO:0007744|PDB:1YDI | 741..764 | 9/22 (41%) | |||
Linker (Pro-rich). /evidence=ECO:0000269|PubMed:20484056 | 836..878 | 21/49 (43%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 857..887 | 17/29 (59%) | |||
C-terminal tail. /evidence=ECO:0000269|PubMed:20484056 | 879..1134 | 130/256 (51%) | |||
Facilitates phospholipid membrane insertion. /evidence=ECO:0000250|UniProtKB:Q64727 | 1003..1046 | 27/43 (63%) | |||
Facilitates phospholipid membrane insertion. /evidence=ECO:0000250|UniProtKB:Q64727 | 1120..1134 | 6/13 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165157782 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3681 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 501 | 1.000 | Inparanoid score | I1367 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S4383 |
OMA | 1 | 1.010 | - | - | QHG51903 | |
OrthoDB | 1 | 1.010 | - | - | D141915at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005827 | |
OrthoInspector | 1 | 1.000 | - | - | oto89294 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106307 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46180 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4806 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.720 |