DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vinc and Ctnna2

DIOPT Version :9

Sequence 1:NP_001284813.1 Gene:Vinc / 31201 FlyBaseID:FBgn0004397 Length:961 Species:Drosophila melanogaster
Sequence 2:NP_001103234.1 Gene:Ctnna2 / 12386 MGIID:88275 Length:953 Species:Mus musculus


Alignment Length:1052 Identity:218/1052 - (20%)
Similarity:394/1052 - (37%) Gaps:261/1052 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TKTIESILDPVAQQVSRLVILHEEAEDGNAMPDLSRPVQVVSAAV----ANLVKVGRDTINSSDD 66
            |.|:|.:|:|:..||:.||....:...|. ....|:...|::|:|    .|.::.|......|.|
Mouse    21 TLTVERLLEPLVTQVTTLVNTSNKGPSGK-KKGRSKKAHVLAASVEQATQNFLEKGEQIAKESQD 84

  Fly    67 KILRQDMPSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVR 131
              |::::.:|:..|....:.:..||.....||.|...|..::..:|.:|...:.||:..|.::|.
Mouse    85 --LKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLLILADMADVM 147

  Fly   132 KIIQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRCLEQ 196
            :::...|.|.:.|...:.....:.|....|:....:.|::.....|::||......:.:......
Mouse   148 RLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGA 212

  Fly   197 VKTLAPILICSMKVYIHIVEQQGRGAEEAA--ENRNYLAARMSDELQEIIRVLQLTTYDEDTSEL 259
            :|..|.:|..:.:.::       |..:.||  .||:|:..::.:.:..|....|.|:..::....
Mouse   213 LKKNATMLYTASQAFL-------RHPDVAATRANRDYVFKQVQEAIAGISSAAQATSPTDEAKGH 270

  Fly   260 DNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCLPQDSYPIRKLA 324
            ..:..|....|...||:                        ::|..|....|..|.....:..:.
Mouse   271 TGIGELAAALNEFDNKI------------------------ILDPMTFSEARFRPSLEERLESII 311

  Fly   325 DEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGVDKAGVQQTAHTIQGRL 389
            .....||::.|                   .||...|  .:|.:.                 ..:
Mouse   312 SGAALMADSSC-------------------TRDDRRE--RIVAEC-----------------NAV 338

  Fly   390 EQAVKWLQHPEINDGGLGERA--INLIVEEGRKVAEGCPGHQKAEIQQLCDEVERLKRQAAGSGP 452
            .||::.|....:|:.|..|:.  :|:.::                                    
Mouse   339 RQALQDLLSEYMNNTGRKEKGDPLNIAID------------------------------------ 367

  Fly   453 AAKQAAKQLTQKLYELKAAIQNALVNRIVQDFMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNN 517
                   ::|:|..:|:..::.|:::.|...|::.:.||....||     ...|.|:...:.:  
Mouse   368 -------KMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEA-----AKSGNEKEVKEYA-- 418

  Fly   518 LQAFSDRASKTSRMVAAGGAC---GNKKIAEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADE 579
             |.|.:.|:|.  :..|..||   .|::..:::..:|.|:|||.||:|:|.......|.||.|.:
Mouse   419 -QVFREHANKL--VEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQD 480

  Fly   580 HLQNLKQQYADTVLRMRTLCDQATDPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIAR 644
            ::...|.|:...|..:....|..|...||:..||.|:......|..|:.    :..||.....|.
Mouse   481 NMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIALQ----EGDVDTLDRTAG 541

  Fly   645 LIN----RVLLVAKQEADNSEDPVFTERLNAAANRL-ERSLPAMVGDAKL----VATNIADPAAA 700
            .|.    ||:.:...|.:|.|..|:||::..|...| |..:|......::    ::.|:..|.. 
Mouse   542 AIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEALSANVPQPFE- 605

  Fly   701 AAWKNSF---QRLLGD-VREVRDAIAPPQPPP----------------LPTSLPPPIPELSALHL 745
               :|.|   .||:.| ||::|.|:...:.|.                ..||:.....:|    :
Mouse   606 ---ENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDVRSRTSVQTEDDQL----I 663

  Fly   746 SNQNAERAPPRPPLPREGLAPVRPPPPETDDEDEGVFRTMPHANQPILIAARGLHQEVRQWSSKD 810
            :.|:|.....:  ||:|..|.:.        |...:|    |..:..|.|      ||.:|....
Mouse   664 AGQSARAIMAQ--LPQEEKAKIA--------EQVEIF----HQEKSKLDA------EVAKWDDSG 708

  Fly   811 NEIIAAAKRMAILMARLSELVLSDSRG-----SKRELIATAKKIAEASEDVTRLAKELARQCTDR 870
            |:||..||:|.::|..:::.    :||     :..::|..|||||||...:.:||:.:|.||.|.
Mouse   709 NDIIVLAKQMCMIMMEMTDF----TRGKGPLKNTSDVINAAKKIAEAGSRMDKLARAVADQCPDS 769

  Fly   871 RIRTNLLQVCERIPTIGTQLKILSTVKATM----------------------------------- 900
            ..:.:||...:||.....||.|.|.|||.:                                   
Mouse   770 ACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGTGVQSTFTTFYEVDCDVIDGGRAS 834

  Fly   901 --------------LGAQGSDEDR-EATEMLVGNAQNLMQSVKETVRAAEGASIKIR-----SDQ 945
                          :|:..||... ::...|:..|:|||.:|..||:|:..||.|.:     :..
Mouse   835 QLSTHLPTCAEGAPIGSGSSDSSMLDSATSLIQAAKNLMNAVVLTVKASYVASTKYQKVYGTAAV 899

  Fly   946 TSNRLQWVRRQP 957
            .|..:.|..:.|
Mouse   900 NSPVVSWKMKAP 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VincNP_001284813.1 Vinculin 63..960 CDD:279395 202/991 (20%)
Ctnna2NP_001103234.1 Vinculin 81..914 CDD:395830 202/991 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..939 218/1052 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3681
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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