DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and SDG38

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_196280.2 Gene:SDG38 / 830550 AraportID:AT5G06620 Length:325 Species:Arabidopsis thaliana


Alignment Length:325 Identity:73/325 - (22%)
Similarity:117/325 - (36%) Gaps:53/325 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TTLAALSAHMAPCRDTTPEQLAQLIDVHLGDLRQEQPNWTISSSTVAGRGVFATRDIAAGELIFQ 83
            ||....|:..|..||              ||.:...|...:..:..|||.|||||.|.||:||..
plant    20 TTPLFFSSSAASNRD--------------GDYQIGPPPIRVGLTESAGRAVFATRKIGAGDLIHT 70

  Fly    84 ERALVTGPTARKGQLSSCICCHETLPQTGFLCR--HRCTLPVCETCSDSEEHQAECEHFRRWQPK 146
            .:.:|..|:..|......:|..:.:....|..|  ..|:    :.|.::.:...:.|....|...
plant    71 AKPVVACPSLLKLDSVCYLCLKKLMGSAKFEDRGVSYCS----QECQENSKGFLDVETRADWSSF 131

  Fly   147 DVDAEQEQVN-PMSLRILTAVRVFHLGKEQRHLVDAMQANAERAYRREIIQAAQ--------CFR 202
            |......... |:.::.|..:.:  .|......:|.:|   ......|:|...:        .||
plant   132 DDYCRTHNFKYPLMVKRLCCMII--SGARPADCLDILQ---PAVLSSEMISKIEDGYGLLWNAFR 191

  Fly   203 --NFPTTDRVFMDQLF--RIVGVLNTNAFEAPCRSG---------------GHETLLRGLFPLTA 248
              ||...|..|:.:.:  .|:..:..|||......|               |...:...::.|.:
plant   192 KANFKDDDVAFLTKQWYTAILARIRINAFRIDLVGGSCGEDLLSLAAASVEGEGAVGHAVYMLPS 256

  Fly   249 IMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDCVRC 313
            ..||:|.|||...:.:...|.:...||:.:|.|:...|.....|...|...|.....|.|:|:||
plant   257 FYNHDCDPNAHIIWLHNADARLNTLRDVEEGEELRICYIDASMGYEARQTILSQGFGFLCNCLRC 321

  Fly   314  313
            plant   322  321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 13/29 (45%)
SET_SMYD <224..313 CDD:380997 24/103 (23%)
SDG38NP_196280.2 SET 43..>75 CDD:394802 13/31 (42%)
SET_SMYD <242..321 CDD:380997 20/78 (26%)

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