DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-8 and ASHR2

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_849991.1 Gene:ASHR2 / 816483 AraportID:AT2G19640 Length:398 Species:Arabidopsis thaliana


Alignment Length:386 Identity:71/386 - (18%)
Similarity:130/386 - (33%) Gaps:86/386 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QPNWTISSSTVAGRG--VFATRDIAAGELIFQERALV---TGPTARKGQLSSCICCHETLPQTGF 113
            :|...:..:.:.|||  :.|.:.:.||::|.:|..|:   ..|.........|..|...|..:..
plant     8 KPETLLRVAEIGGRGRSLVAAQSLRAGQVILRESPLLLYSAFPFLSSSVSPYCDHCFRLLASSAH 72

  Fly   114 LCRHRCTL-PVCETCSDSEEHQAECEHFRRWQPKDVDAEQEQVNPMSLR---ILTAVRVFHLGKE 174
            .....|:| ..|.....:......||..||.......|..:|.:...::   :|:|..:......
plant    73 QKCQSCSLVSFCSPNCFASHTPWLCESLRRLHQSSSSAFSDQPSDRQVQARFLLSAYNLAAASPS 137

  Fly   175 QRHLVDAMQA--------------NAERAYRREIIQAAQCFRNFPTTDRVFMDQLFRIVGVLNTN 225
            ...::.::|.              :|...:...::.:. | .:.|.:  :..|....::.....|
plant   138 DFQILLSLQGSGSSNGDPSCSAGDSAAAGFLHSLLSSV-C-PSLPVS--ISPDLTAALLSKDKVN 198

  Fly   226 AF--EAPCRSGGHETLLR--GLFPLTAIMNHECTPNASHY------FENGRLAVVRAARDIPKGG 280
            ||  ..||.....:..:|  |::|.|:..||:|.|||..:      .:.....::|...|:|:|.
plant   199 AFGLMEPCSVSNEKRSVRAYGIYPKTSFFNHDCLPNACRFDYVDSASDGNTDIIIRMIHDVPEGR 263

  Fly   281 EITTTYTKILWGNLTRNIFLKMTKHFACDCVRCH------------------------------- 314
            |:..:|..:.....:|...|.....|.|||.||.                               
plant   264 EVCLSYFPVNMNYSSRQKRLLEDYGFKCDCDRCKVEFSWSEGEEDENEIMEEMEDQDEQEEMEDS 328

  Fly   315 --DNTE----NGT----------YLSALFCREQGCRGLVIPVQTRTLQPD--WRCITCENV 357
              :|.|    ||.          :.....|.::.|.|.:.|:..:|....  ..|..|.:|
plant   329 VGENEEEVCGNGVDDESNFPHAYFFVRYMCEKENCFGTLAPLPPKTHDASRVLECNVCGSV 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 8/31 (26%)
SET_SMYD <224..313 CDD:380997 27/98 (28%)
ASHR2NP_849991.1 SET_SMYD <198..296 CDD:380997 27/97 (28%)

Return to query results.
Submit another query.