DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and SMYD2

DIOPT Version :9

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:467 Identity:104/467 - (22%)
Similarity:161/467 - (34%) Gaps:150/467 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GRGVFATRDIAAGELIFQERALVTGPT------------ARKGQLSSCICCHETLPQTGFLCRHR 118
            |||:.|.:....|:|:|...|.....|            .||..||.|..|.:     .|.|...
Human    18 GRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKEGLSKCGRCKQ-----AFYCNVE 77

  Fly   119 CTLPVCETCSDSEEHQAECEHF----RRWQPKD-------VDAEQEQVNP---MSLRILTAVRVF 169
            |..      .|...|:.||...    ..|.|.:       :.|:| :::|   .|.::| ||:.|
Human    78 CQK------EDWPMHKLECSPMVVFGENWNPSETVRLTARILAKQ-KIHPERTPSEKLL-AVKEF 134

  Fly   170 --HLGK---EQRHLVDAMQANAERAYRREIIQAAQCFRNFPTTDRVFMDQLFRIVGVLNTNAFEA 229
              ||.|   |::.|:.:..|.....|.:.:        .||..|.:.:  ||..|   |.|.|..
Human   135 ESHLDKLDNEKKDLIQSDIAALHHFYSKHL--------GFPDNDSLVV--LFAQV---NCNGFTI 186

  Fly   230 PCRSGGHETLLRGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNL 294
            ......|  |...:||..|:|||.|.||....:: |.||.|||.::|..|.|:.|:|..:|:...
Human   187 EDEELSH--LGSAIFPDVALMNHSCCPNVIVTYK-GTLAEVRAVQEIKPGEEVFTSYIDLLYPTE 248

  Fly   295 TRNIFLKMTKHFACDCVRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVFP 359
            .||..|:.:..|.|:|..|....::..                 .|:.|.|...          |
Human   249 DRNDRLRDSYFFTCECQECTTKDKDKA-----------------KVEIRKLSDP----------P 286

  Fly   360 HAKMAKYQDFALNTINNRINSCSVQDMIHFINELCPRFCPSSNY----------VLIEAKLNVIW 414
            .|:                   :::||:.:...:...|..:.:|          .|.:.|::.::
Human   287 KAE-------------------AIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVF 332

  Fly   415 RMTRFDHEEYTPEEMG------------------------HMDRYREEVLAILHKLG-------- 447
            ..:.........:.||                        |...|...|.::..|||        
Human   333 EDSNVYMLHMMYQAMGVCLYMQDWEGALQYGQKIIKPYSKHYPLYSLNVASMWLKLGRLYMGLEH 397

  Fly   448 --AGECTLKKLI 457
              |||..|||.|
Human   398 KAAGEKALKKAI 409

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 33/103 (32%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 78/279 (28%)