DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and smyd2a

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001013568.1 Gene:smyd2a / 541423 ZFINID:ZDB-GENE-050320-126 Length:435 Species:Danio rerio


Alignment Length:426 Identity:101/426 - (23%)
Similarity:160/426 - (37%) Gaps:73/426 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GRGVFATRDIAAGELIF--QERALVTGPTARKGQLSSCICCHETLPQTG-----FLCRHRCTLPV 123
            |||:.|.:....|:|:|  ...|.|.....|.|:...|....|.|.:.|     :.|...|..  
Zfish    18 GRGLKAIKHFKVGDLVFACPAYAYVLTVNERGGRCECCFTRKEGLSKCGKCKQAYYCNVECQR-- 80

  Fly   124 CETCSDSEEHQAECE----HFRRWQPKDV----------DAEQEQVNPMSLRILTAVRV-FHLGK 173
                .|...|:.||.    :...|.|.:.          ...|.:..| |.|:||...: .||.|
Zfish    81 ----GDWPMHKLECSAMCAYGENWCPSETVRLVARIILKQKHQTERTP-SERVLTLRELEAHLDK 140

  Fly   174 ---EQRHLVDAMQANAERAYRREIIQAAQCFRNFPTTDRVFMDQLFRIVGVLNTNAFEAPCRSGG 235
               |:..:.|...|.....|.|.:        :||  |...:.:|   :..:|.|.|........
Zfish   141 LDNEKNEMNDTDIAALHHFYSRHL--------DFP--DNAALTEL---IAQVNCNGFTIEDEELS 192

  Fly   236 HETLLRGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTRNIFL 300
            |  |...|||..|:|||.|:||....:: |.:|.|||.::|....||..:|..:|:....|...|
Zfish   193 H--LGSALFPDVALMNHSCSPNVIVTYK-GTVAEVRAVQEINPEEEIFNSYIDLLYPTEDRIERL 254

  Fly   301 KMTKHFACDCVRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVFPHAKMAK 365
            |.:..|.|||..|...:::...:.   .|::    |.||.:...::.  ..|...||....:.||
Zfish   255 KDSYFFNCDCKECTSKSKDEAKME---IRQK----LSIPPEEEEIKQ--MVIYARNVIEEFRRAK 310

  Fly   366 YQDFALNTINNRINSCSVQDMIHFINELCPRFCPSSNYVL--IEAKLNVIWRMTRFD-----HEE 423
            :    ..|.:..:..|.:.     :.::...|..::.|:|  :...:.|...|..:|     .|:
Zfish   311 H----YKTPSELLEICELS-----MEKMGAIFAETNVYMLHMMYQAMGVCLYMQDWDGAMKYGEK 366

  Fly   424 YTPEEMGHMDRYREEVLAILHKLGAGECTLKKLITG 459
            .......|...|...|.::..|||.....|:|...|
Zfish   367 IIHPYSVHYPPYSLNVASMYLKLGRLYLGLEKRTQG 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 8/23 (35%)
SET_SMYD <224..313 CDD:380997 31/88 (35%)
smyd2aNP_001013568.1 SET 7..269 CDD:394802 74/273 (27%)
zf-MYND 52..90 CDD:460312 8/43 (19%)
TPR_12 382..>424 CDD:315987 7/21 (33%)

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