DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and smyd5

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001004614.2 Gene:smyd5 / 447875 ZFINID:ZDB-GENE-040912-39 Length:415 Species:Danio rerio


Alignment Length:372 Identity:84/372 - (22%)
Similarity:120/372 - (32%) Gaps:139/372 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 STVAGRGVFATRDIAAGELIFQERALVTG--------------------PTA-----RKGQLSSC 101
            :.|.|:|:||.:....|:.||.||.||:.                    .||     |...|.:.
Zfish    28 NNVKGKGLFAKKPFKKGDTIFIERPLVSSQFLWNALYKYRACEYCLRALETAEENARRLSGLPAL 92

  Fly   102 ICCHETLPQTGFLC-----RHRCTLPVCET--CSDSEEHQAECEHFRR----------------- 142
            |..|   |:   ||     ||: ..|.|:.  || ||..||..:.:.:                 
Zfish    93 ILPH---PE---LCKVRPDRHQ-ACPQCQVMYCS-SECRQAAMDQYHKILCLGPSNDDPDHPVNK 149

  Fly   143 ----WQPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQRHLVD--AMQANAERAYRREIIQ----- 196
                |:......|...|..::..:.|..:.....:.||...:  :..||.|    .||:.     
Zfish   150 LQDAWRSVHFPPETSSVMILAKMVATIKQTQDKERWQRLFTNFCSRTANEE----EEIVHKLLGE 210

  Fly   197 ----AAQCFRNFPTT----DRV---FMDQLFR-IVGVLNTN-----------------AFEAP-- 230
                .....||..||    ||:   |..:.|| :..::.||                 |.|.|  
Zfish   211 KFQGQLGLLRNLFTTALYEDRLSQWFTPEGFRSLFSLVGTNGQGIGTSSLSQWVHACDALELPRQ 275

  Fly   231 -------------------------CRSGGHETLLRGLFPLTAIMNHECTPNASHYF-ENGRLAV 269
                                     |...       |||.|.:..||.|.|||...| ||..|..
Zfish   276 QREQLDAFIDQLYKDIDKETGDFLNCEGS-------GLFLLQSSCNHSCVPNAEASFPENNFLLH 333

  Fly   270 VRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKH---FACDCVRC 313
            :.|..||..|.||..:|......:.:|:...|:.:.   |.|.|.:|
Zfish   334 LTALGDIGPGEEICISYLDCCQRDRSRHSRHKILRENYLFICSCQKC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 10/25 (40%)
SET_SMYD <224..313 CDD:380997 32/136 (24%)
smyd5NP_001004614.2 SET_SMYD5 21..383 CDD:380919 84/372 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..415
Blue background indicates that the domain is not in the aligned region.

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