DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and Smyd4-2

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster


Alignment Length:440 Identity:103/440 - (23%)
Similarity:153/440 - (34%) Gaps:135/440 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GGDTTLAALSAHMAPCR-----------DTTPEQLAQLIDVHLGDLRQEQPNWTISSSTVA---- 65
            |.|.|      |:|.||           :.|.||:.||......:|        :.:|.|.    
  Fly   210 GCDAT------HIALCRKELSSVKPKPKEATSEQVPQLAHGESAEL--------VGASKVVRLVE 260

  Fly    66 ----GRGVFATRDIAAGE-LIFQERALVTGPTARKGQLSSCI-------CCHETLPQ--TGFLCR 116
                ||.|.|...:..|: |:|:|      |.|      :|:       .||....:  |...|.
  Fly   261 TKDKGRFVVANEGLRTGDVLLFEE------PVA------ACLEPSYFGTHCHHCFKRLHTPVSCL 313

  Fly   117 HRCTLPVC------ETCSDSEEHQAECEHFRRWQPKDVDAEQEQVNPMSLRILTAVRVF------ 169
            |...:..|      |.|  |..|:.|||:.          :....:.||:....|:|:|      
  Fly   314 HCSGIAFCSAQCMGEAC--SSYHRFECEYM----------DLMIGSGMSILCFIALRIFTQAPSL 366

  Fly   170 ------------HL--GKEQRHLVDAMQANAERAYRREIIQAAQCFR-------NFPTTDRVFMD 213
                        ||  .:|.|...|.::......:...|:|.:..|.       |....:.....
  Fly   367 EQGLATANLLFEHLCSHEEDRQPDDYLRRALMSGFLLRILQKSLYFGRRKTEGVNPTAVELQVAT 431

  Fly   214 QLFRIVGVLNTNAFE-------APCRSGGHET--LLRGLFPLTAIMNHECTPNASHYFENGRLAV 269
            .|..::.||..||.:       ...|..|.:|  |..||:...:..||||.|:.:.:|. |:..|
  Fly   432 ALLGLLQVLQYNAHQIYQTQVTEEHRFDGSKTVYLAAGLYGTGSYFNHECWPSTACHFV-GKKLV 495

  Fly   270 VRAARDIPKGGEITTTYTKI-LWGNL-TRNIFLKMTKHFACDCVRCHDNTENGTYLSAL------ 326
            :.|.|.......:...|..| :..|| .|...|:....|:|.|:.|.   ||...|..|      
  Fly   496 LTATRPHRANELVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQ---ENWPLLQKLDKQVRF 557

  Fly   327 FCREQGCRGLV-IPVQTRTLQPDWRCITC-------ENVFPHAKMAKYQD 368
            :|....|..|: .|   :.|..|.||..|       |:|   |||.|.::
  Fly   558 WCTSANCSNLLKFP---KDLAKDVRCPRCRKNISLKESV---AKMIKIEE 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 10/38 (26%)
SET_SMYD <224..313 CDD:380997 27/99 (27%)
Smyd4-2NP_648574.1 BepA 87..205 CDD:443813
SET_SMYD4 249..541 CDD:380934 71/324 (22%)
zf-MYND 299..338 CDD:460312 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.

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