DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and SmydA-5

DIOPT Version :9

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_610202.3 Gene:SmydA-5 / 35538 FlyBaseID:FBgn0033061 Length:553 Species:Drosophila melanogaster


Alignment Length:433 Identity:120/433 - (27%)
Similarity:172/433 - (39%) Gaps:92/433 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 HMAPCRDTTPEQLAQLIDVHLGDLRQEQPNWTISSSTVAGRGVFATRDIAAGELIFQERALVTGP 91
            |...||..:.||.|:|                       ||.:..|::||||:::|.|..||.||
  Fly    39 HKRRCRPFSEEQDAEL-----------------------GRYLKVTQNIAAGQIVFIEEPLVVGP 80

  Fly    92 TARKGQLSS---------CICCHETLPQTGFLCRHRCTLPVCET-CSDSEEHQA-ECEHFRRWQP 145
               |..||.         |:.|:.........|| ||..|||.. |    :|:: ||........
  Fly    81 ---KWYLSDADKEASNVPCVGCYTPCRLGKHQCR-RCRWPVCSAGC----KHESMECSVLSLGSG 137

  Fly   146 KDVDAEQEQVNPM----SLRILTAVRVFHLGKEQRHLVDAMQANAERAYRREIIQAAQ------- 199
            ....|:...:|..    :|.:|..:.:......:...:..||::.|.....::.:.|:       
  Fly   138 SPTRADARSLNDYFRGDALLVLKCLLLQRQSPTKWSALLEMQSHEEERKGTDLYEEAEKRVVTYL 202

  Fly   200 -----CFRNFPTTDRVFMD----QLFRIVGVLNTNAFEAPCRSGGHETLLRGLFPLTAIMNHECT 255
                 | |...|...:..|    .|.|:.|::.||.......||   ..|.|||....:|.|.|.
  Fly   203 QKRFLC-RLKQTNPNLLTDCGPEMLHRLCGIIETNFMVIELPSG---VELSGLFRQACMMEHACQ 263

  Fly   256 PNASHYFENGRLAV-VRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDCVRCHDNTEN 319
            ||....|:|....| |||..|:.||..:..|||.||||...|...|::||||:|.|.||.|.||.
  Fly   264 PNCDFQFDNKTQQVAVRAGCDLRKGDHLRITYTNILWGTQLRQHHLRLTKHFSCRCSRCLDPTEY 328

  Fly   320 GTYLSALFCR---EQGCRGLVIPVQTRTLQPDWRCITCENVFPHAKMAKYQDFALNTINNRINSC 381
            |||:|||.|.   .|.|.|..:||........|:|.||..:...|.:|:.|......:...:.. 
  Fly   329 GTYISALTCLGDVNQTCGGTHLPVDPLDENTQWKCDTCPMIVDGAYVAELQSHMTEQVEGLLAG- 392

  Fly   382 SVQDMIHFINELCPRFCPSSNYVLIEAKLNVIWRMTRFDHEEY 424
                            |||:|.|.:     ::.|:|...|..:
  Fly   393 ----------------CPSANQVEL-----LLARLTHMLHPNH 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 36/120 (30%)
SmydA-5NP_610202.3 zf-MYND 7..43 CDD:280009 1/3 (33%)
SET 185..295 CDD:279228 30/113 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473052
Domainoid 1 1.000 54 1.000 Domainoid score I11197
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46455
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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