DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and smyd1a

DIOPT Version :9

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_991103.2 Gene:smyd1a / 321245 ZFINID:ZDB-GENE-030131-9825 Length:485 Species:Danio rerio


Alignment Length:419 Identity:97/419 - (23%)
Similarity:166/419 - (39%) Gaps:87/419 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GRGVFATRDIAAGELIFQE---RALVTGPTARKGQLSSCICC--HETLPQTGFLCR--HRCTLPV 123
            |||:..|||::|||::|.|   .|:|....:    |..|..|  .:..|.....|:  |.|.   
Zfish    18 GRGLRGTRDLSAGEVVFAEASFAAVVLDSLS----LQVCHSCFRRQVNPHRCAQCKFAHYCD--- 75

  Fly   124 CETCSDS--EEHQAECEHFRRWQPKDVDAEQEQVNPMSLRILTAVRVFHLG---KEQRHLVDAMQ 183
             .||..:  :||:.||...|...    .|..|.|. :..|||..::. |.|   ..|...:|.::
Zfish    76 -RTCQRAAWDEHRKECSAIRNIG----KAPNENVR-LVARILWRIQK-HTGLVSDSQLTTLDMLE 133

  Fly   184 ANAERAYRREIIQAAQCFRNFPT-----TDRVFMDQLFRIVGVLNTNAFEAPCRSGGHETLLRGL 243
            .:..|....::.:.....:.|.|     :..|..|.:..:.||::.|.|....:. |.:::..||
Zfish   134 DHLSRMTPEDLKELKVDVKTFYTYWPKKSKAVGEDYVSHLFGVISCNGFTLSDQR-GLQSVGIGL 197

  Fly   244 FPLTAIMNHECTPNA----SH--------YFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTR 296
            ||...::||:|.||.    :|        .|.:.|...:||...|..|.|:|.:|...|..:..|
Zfish   198 FPNLCLVNHDCWPNCTVILNHGDQSALDASFHSSRRIELRALEPISAGQELTVSYVDFLSVSTDR 262

  Fly   297 NIFLKMTKHFACDCVRCHDNTENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVFPHA 361
            ...|:...:|.|.|..|.:.|:: ..::|:...|.|.:                        |.|
Zfish   263 QRLLQQQYYFDCKCEHCVNGTKD-ELMTAVKPTEDGKQ------------------------PSA 302

  Fly   362 KMAK-YQDFALNTINNRINSCSVQDMIHFINELC--------PRFCPSSNYVL--IEAKLNVIWR 415
            ::.| ..||:|..: .:|.:...|...|.:..:|        |.|..::.:||  :.....|:..
Zfish   303 EVVKQLTDFSLQAL-VKIEAARAQGNFHEVIRICRECLEKQDPVFADTNVHVLRVLSTASEVLSF 366

  Fly   416 MTRFDHEEYTPEEMGHMDRYREEVLAILH 444
            :.:|.      |..|:..|..:..:.:.|
Zfish   367 LQQFQ------EAAGYAQRMVDGYMKLYH 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 29/120 (24%)
smyd1aNP_991103.2 zf-MYND 52..90 CDD:280009 10/41 (24%)
SET <203..252 CDD:279228 14/48 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582762
Domainoid 1 1.000 54 1.000 Domainoid score I11197
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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