DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and SmydA-4

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster


Alignment Length:445 Identity:114/445 - (25%)
Similarity:192/445 - (43%) Gaps:57/445 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 QEQPNWTISSSTVAGRGVFATRDIAAGELIFQERALVTGPTARKGQLSSCICCHE--TLPQTGFL 114
            :|.| :.:..|.:.||.:.|.|.:.|||.:.:|..|..||......:  |:.|:.  :|....:.
  Fly    45 KELP-YRVEHSDIYGRYLVANRQLEAGETLIREEPLAIGPCVSGDPV--CLGCYHPVSLKADQYR 106

  Fly   115 CRHRCTLPVC-ETCSDSEEH----QAECEHFRRWQPKDVDAEQEQVNPMSLR----ILTAVRVFH 170
            | ..|..|:| .||:..:..    :.||:.:...:....:...|:..|..:|    ::..||:..
  Fly   107 C-PGCAWPLCGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAEVRDLYELVMIVRILL 170

  Fly   171 LGK---EQRHLVDAMQANAE---------RAYRREIIQAAQCFRNFPTTDRVFMDQLFRIVGVLN 223
            |.:   ||..|:..|:::.|         |.|..:::|..:........:   .:|:..:.|:|:
  Fly   171 LRQHDPEQFALIARMESHTEERRQNAVLWRHYEEKVVQRLRVTWQLEDLE---AEQVHEVCGILD 232

  Fly   224 TNAFEAPCRSGGHETLLRGLFPLTAIMNHECTPNASHYFENGRLAV-VRAARDIPKGGEITTTYT 287
            .|.||.    |.:....|.|:|...::.|:||||.:|..:.....: :|.:|.:.:...:|.:|.
  Fly   233 VNCFEI----GQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEILLRTSRRVREREALTLSYA 293

  Fly   288 KILWGNLTRNIFLKMTKHFACDCVRCHDNTENGTYLSALFCREQGCR-GLVIPVQTRTLQPDWRC 351
            ..|.|.|.|..|:...|.|.|.|.||.|..|.||..|||.|..  || |.|..|.......||.|
  Fly   294 YTLQGTLKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALVCAT--CRTGSVRAVDPLQQTGDWAC 356

  Fly   352 ITCENVFPHAKMAKYQDFALNTINNRINSCSVQD-------MIHFINELCPRFCPSSNYVLIEAK 409
            ..|    .|...|...:..|:.|||.:....|.|       ::.:.:.|.|     ::|:|:.||
  Fly   357 DRC----AHKMGATEVERQLDRINNDLEDIDVHDIPGLENFLLRYRDVLRP-----NHYLLLSAK 412

  Fly   410 LN---VIWRMTRFDHEEYTPEEMGHMDRYREEVLAILHKLGAGECTLKKLITGEI 461
            .:   :..|...:...:.:||::...:.|..|.|.|:..|..|...|:.||..|:
  Fly   413 YSLCQIYGRTEGYLLPQMSPEDIARKESYCREFLEIVDVLDPGLTRLRGLIMYEL 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 9/29 (31%)
SET_SMYD <224..313 CDD:380997 26/89 (29%)
SmydA-4NP_572675.1 SET_SMYD <230..319 CDD:380997 27/92 (29%)

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