DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-8 and Smyd5

DIOPT Version :10

Sequence 1:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:369 Identity:77/369 - (20%)
Similarity:113/369 - (30%) Gaps:136/369 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TVAGRGVFATRDIAAGELIFQERALVTGPTARKG--QLSSCICC--------------------- 104
            ::.|:|:|||:.|..||.||.||.||........  |..:|..|                     
Mouse    30 SIKGKGLFATQLIRKGETIFIERPLVAAQFLWNALYQYRACDHCLRALEKAEENAQRLTGKPSQI 94

  Fly   105 -------------HETLPQTGFL-CRHRCTLPVCETCSDSEEHQAEC---EHFRR---------W 143
                         |:..|....: |...|.|...|     :.||..|   .|..|         |
Mouse    95 LPHPELCSVRKDLHQNCPHCQVMYCSAECRLAAAE-----QYHQILCPGPSHDPRHPLNKLQEAW 154

  Fly   144 QPKDVDAEQEQVNPMSLRILTAVRVFHLGKEQRHLVD------AMQANAERAYRREIIQ------ 196
            :......|...:..|:..:.|..:    .|::.|.|.      :..||.|:|...::::      
Mouse   155 RSVHYPPETASIMLMARMVATVKQ----AKDKDHWVRLFNHFCSRTANQEQAIVHKLLKGKFKDQ 215

  Fly   197 ---------------------AAQCFRN----------------------------FPTTDR--- 209
                                 ..:.||:                            ....||   
Mouse   216 LELLLGLFKEALYEEALSLWFTPEGFRSLFALVGTNGQGIGTSSLSQWVHACDALELTPQDREQL 280

  Fly   210 -VFMDQLFRIVGVLNTNAFEAPCRSGGHETLLRGLFPLTAIMNHECTPNASHYF-ENGRLAVVRA 272
             .|:|||::.:... |..| ..|...       |||.|.:..||.|.|||...| ||..:..|.|
Mouse   281 DTFIDQLYKDIEAA-TGEF-LNCEGS-------GLFVLQSCCNHSCVPNAETSFPENNFVLHVTA 336

  Fly   273 ARDIPKGGEITTTYTKILWGNLTRNIFLKMTKH---FACDCVRC 313
            ..||..|.||..:|........:|:...|:.:.   |.|.|.:|
Mouse   337 LEDIKPGEEICISYLDCCQRERSRHSRHKILRENYLFNCSCPKC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-8NP_001014717.1 SET 58..>88 CDD:394802 12/24 (50%)
SET_SMYD <224..313 CDD:380997 29/92 (32%)
Smyd5NP_659167.2 SET_SMYD5 22..383 CDD:380919 77/369 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416
Blue background indicates that the domain is not in the aligned region.

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